RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 PEA15Q15121 130 aa18.47■□□□□ 0.55
SHMT1-202ENST00000352886 ODF3L1Q8IXM7 274 aa18.47■□□□□ 0.55
SHMT1-202ENST00000352886 Q8IYB0 196 aa18.47■□□□□ 0.55
SHMT1-202ENST00000352886 FAM213BQ8TBF2 198 aa18.47■□□□□ 0.55
SHMT1-202ENST00000352886 TAAR3PQ9P1P4 343 aa18.47■□□□□ 0.55
SHMT1-202ENST00000352886 A0A0G2JRQ6 117 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 WRBO00258 174 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 CHST1O43916 411 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 SERPINE2P07093 398 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 PSG2P11465 335 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 EPHA1P21709 976 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 TMEM217Q8N7C4 229 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 TREM2Q9NZC2 230 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 MLXQ9UH92 298 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 TRAPPC2LQ9UL33 140 aa18.46■□□□□ 0.55
SHMT1-202ENST00000352886 A0A1B0GV50 99 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 K7N7A8 449 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 HEXAP06865 529 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 AKIRIN2Q53H80 203 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 ZNF497Q6ZNH5 498 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 FDCSPQ8NFU4 85 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 OR1J1Q8NGS3 322 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 OR2G3Q8NGZ4 309 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 UBALD1Q8TB05 177 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 WISP2O76076 250 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 NXPH2O95156 264 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 FAM214BQ7L5A3 538 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 MOB1BQ7L9L4 216 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 RNF115Q9Y4L5 304 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 KIAA2026Q5HYC2 2103 aa18.45■□□□□ 0.54
SHMT1-202ENST00000352886 NPIPB11E5RHQ5 1161 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 PGA5P0DJD9 388 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 MMP9P14780 707 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 RAC2P15153 192 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 LMO1P25800 156 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 DYNLT3P51808 116 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 PSG7Q13046 419 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 TESK1Q15569 626 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 ETV3LQ6ZN32 361 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 ASPMQ8IZT6 3477 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 HSPA12AO43301 675 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 IGLV2-14P01704 120 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 IGHG3P01860 377 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 GRPP07492 148 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 SELEP16581 610 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 PPP1CCP36873 323 aaKnown RBP18.44■□□□□ 0.54
SHMT1-202ENST00000352886 RPL35P42766 123 aaKnown RBP18.44■□□□□ 0.54
SHMT1-202ENST00000352886 HMGN3Q15651 99 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 GABRA6Q16445 453 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 LURAP1LQ8IV03 231 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 CNEP1R1Q8N9A8 125 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 GPR146Q96CH1 333 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 GTF3C1Q12789 2109 aa18.44■□□□□ 0.54
SHMT1-202ENST00000352886 H0YL77 283 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.43■□□□□ 0.54
SHMT1-202ENST00000352886 CD82P27701 267 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 BAXQ07812 192 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 Q6ZT83 130 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 RBM7Q9Y580 266 aaKnown RBP18.43■□□□□ 0.54
SHMT1-202ENST00000352886 CDRT15L2A8MXV6 281 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 IQCF6A8MYZ5 107 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 HOXA1P49639 335 aaPredicted RBP18.43■□□□□ 0.54
SHMT1-202ENST00000352886 PAX9P55771 341 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 ZNF146Q15072 292 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 LINC00469Q8N7U9 141 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 RNASE11Q8TAA1 199 aaKnown RBP18.43■□□□□ 0.54
SHMT1-202ENST00000352886 C12orf57Q99622 126 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 PPP1R3CQ9UQK1 317 aa18.43■□□□□ 0.54
SHMT1-202ENST00000352886 AKR1D1P51857 326 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 OR8G1Q15617 311 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 IZUMO4Q1ZYL8 232 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 INO80CQ6PI98 192 aaPredicted RBP18.42■□□□□ 0.54
SHMT1-202ENST00000352886 FBXO7Q9Y3I1 522 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 SH2D1BO14796 132 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 MPV17P39210 176 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 AKR1C3P42330 323 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 RXFP4Q8TDU9 374 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 ABHD14AQ9BUJ0 271 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 PBDC1Q9BVG4 233 aa18.42■□□□□ 0.54
SHMT1-202ENST00000352886 A0A1B0GU03 582 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 KLF14Q8TD94 323 aaPredicted RBP18.41■□□□□ 0.54
SHMT1-202ENST00000352886 OR14J1Q9UGF5 321 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 KCNS2Q9ULS6 477 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 UMAD1C9J7I0 102 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 GPR37O15354 613 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 CEBPDP49716 269 aaPredicted RBP18.41■□□□□ 0.54
SHMT1-202ENST00000352886 LFNGQ8NES3 379 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 DEFB124Q8NES8 71 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 TINAGQ9UJW2 476 aa18.41■□□□□ 0.54
SHMT1-202ENST00000352886 PIGBOS1A0A0B4J2F0 54 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 H3BP45 60 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 AGFG2O95081 481 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 IGKV1-39P01597 117 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 IGKV1D-39P04432 117 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 SLC25A6P12236 298 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 GUSBP1Q15486 140 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 Q6ZRM9 215 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 PIP4P1Q86T03 277 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 OBP2BQ9NPH6 170 aa18.4■□□□□ 0.54
SHMT1-202ENST00000352886 MBNL3Q9NUK0 354 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms