RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 IGKV1D-33P01593 117 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 IGKV1-33P01594 117 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 PF4V1P10720 104 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 FUT3P21217 361 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 IL3RAP26951 378 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 ZNF137PP52743 207 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 C9orf152Q5JTZ5 239 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 C6orf183Q5T699 404 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 SYT6Q5T7P8 510 aaPredicted RBP14.06□□□□□ -0.16
HDDC3-201ENST00000330334 UNQ9370/PRO34162Q6UXP9 181 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 ZNF554Q86TJ5 538 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 CHPT1Q8WUD6 406 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 Q96M66 194 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 ETAA1Q9NY74 926 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 TRAPPC2LQ9UL33 140 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 PEX16Q9Y5Y5 336 aa14.06□□□□□ -0.16
HDDC3-201ENST00000330334 PNMA8CA0A1B0GUJ8 204 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 A0A1W2PPE3 182 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 PSMB11A5LHX3 300 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 C12orf77C9JDV5 145 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 IGHG2P01859 326 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 MGMTP16455 207 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 CD33P20138 364 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 CD1BP29016 333 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 HNF4GQ14541 408 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 C10orf99Q6UWK7 81 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 SLC25A48Q6ZT89 311 aaKnown RBP14.05□□□□□ -0.16
HDDC3-201ENST00000330334 MOB3BQ86TA1 216 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 COMMD1Q8N668 190 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 Q8N6K4 173 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 TMEM104Q8NE00 496 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 RTN4IP1Q8WWV3 396 aaPredicted RBP14.05□□□□□ -0.16
HDDC3-201ENST00000330334 EAF1Q96JC9 268 aaPredicted RBP14.05□□□□□ -0.16
HDDC3-201ENST00000330334 MND1Q9BWT6 205 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 SELENOIQ9C0D9 397 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 DCLRE1BQ9H816 532 aa14.05□□□□□ -0.16
HDDC3-201ENST00000330334 TXNL1O43396 289 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 DUS4LO95620 317 aaKnown RBP14.04□□□□□ -0.16
HDDC3-201ENST00000330334 CDK1P06493 297 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 UBBP0CG47 229 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 SLC6A1P30531 599 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 GPR50Q13585 617 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 SIGIRRQ6IA17 410 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 Q6ZPA2 131 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 TGIF2LXQ8IUE1 241 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 ZNF439Q8NDP4 499 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 OR8H1Q8NGG4 311 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 OR2T10Q8NGZ9 312 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 PHYHIPQ92561 330 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 SGCDQ92629 289 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 PHF21AQ96BD5 680 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 CST11Q9H112 138 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 BANF2Q9H503 90 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 ZFP57Q9NU63 452 aa14.04□□□□□ -0.16
HDDC3-201ENST00000330334 MBNL3Q9NUK0 354 aaKnown RBP14.04□□□□□ -0.16
HDDC3-201ENST00000330334 H0YHG0 523 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 CRTAPO75718 401 aaPredicted RBP14.03□□□□□ -0.16
HDDC3-201ENST00000330334 HBZP02008 142 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 PF4P02776 101 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 CD37P11049 281 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 SLC35A2P78381 396 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 ACSM3Q53FZ2 586 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 C6orf141Q5SZD1 244 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 OR4K15Q8NH41 348 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 RCC1LQ96I51 464 aaKnown RBP14.03□□□□□ -0.16
HDDC3-201ENST00000330334 LIN7CQ9NUP9 197 aaKnown RBP14.03□□□□□ -0.16
HDDC3-201ENST00000330334 GNG12Q9UBI6 72 aa14.03□□□□□ -0.16
HDDC3-201ENST00000330334 DNAH3Q8TD57 4116 aa14.02□□□□□ -0.16
HDDC3-201ENST00000330334 SERPINE3A8MV23 424 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 PDCD6O75340 191 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 RCC1P18754 421 aaPredicted RBP14.02□□□□□ -0.17
HDDC3-201ENST00000330334 REG1BP48304 166 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 ZNF134P52741 427 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 GP2P55259 537 aaKnown RBP14.02□□□□□ -0.17
HDDC3-201ENST00000330334 SLC35B1P78383 322 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 SPHARQ15513 63 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 CT45A1Q5HYN5 189 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 C1orf100Q5SVJ3 147 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 GLT8D1Q68CQ7 371 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 SLC35E3Q7Z769 313 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 ZNF329Q86UD4 541 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 FOXRED2Q8IWF2 684 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 CT45A3Q8NHU0 189 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 UBALD1Q8TB05 177 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 ABCG5Q9H222 651 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 PLSCR3Q9NRY6 295 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 SCN3BQ9NY72 215 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 LSM2Q9Y333 95 aaKnown RBP14.02□□□□□ -0.17
HDDC3-201ENST00000330334 LRRC42Q9Y546 428 aa14.02□□□□□ -0.17
HDDC3-201ENST00000330334 IGHV3-43A0A0B4J1X8 118 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 PTGES3LE9PB15 166 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 MOSP00540 346 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 PRB2P02812 416 aaPredicted RBP14.01□□□□□ -0.17
HDDC3-201ENST00000330334 IGHV3-43DP0DP04 118 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 IGLL1P15814 213 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 VHLP40337 213 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 RPL23AP62750 156 aaKnown RBP14.01□□□□□ -0.17
HDDC3-201ENST00000330334 HTD2P86397 168 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 LY6G6FQ5SQ64 297 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 FOXB2Q5VYV0 432 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms