RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 A0A1B0GUS0 222 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 LMO7DNF2Z398 122 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 TNFSF11O14788 317 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 FUT6P51993 359 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 HERPUD1Q15011 391 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 MRGPRGQ86SM5 289 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 UBALD1Q8TB05 177 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
COL6A2-202ENST00000310645 GCGP01275 180 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 IFNA1P01562 189 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 BCL3P20749 454 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 RAB4BP61018 213 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 PRR18Q8N4B5 295 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 OR51G1Q8NGK1 321 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 GATAD1Q8WUU5 269 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 TMEM54Q969K7 222 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 CHRNA10Q9GZZ6 450 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 SLC25A22Q9H936 323 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 IL17BQ9UHF5 180 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF705FA8MVS1 300 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 CELA2AP08217 269 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF705DP0CH99 300 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF705BP0CI00 300 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 FGF5P12034 268 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 BMP5P22003 454 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 FAM3BP58499 235 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 RPS16P62249 146 aaKnown RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF705AQ6ZN79 300 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 BEND2Q8NDZ0 799 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 PTRH2Q9Y3E5 179 aaKnown RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 UBE2L5PA0A1B0GUS4 154 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 CD33P20138 364 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 CRYGSP22914 178 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 CHRNA7P36544 502 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 MLF1P58340 268 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 FAM27BQ5VT28 67 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 OR4F5Q8NH21 305 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 OR4F4Q96R69 305 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
COL6A2-202ENST00000310645 RBM7Q9Y580 266 aaKnown RBP12.57□□□□□ -0.4
COL6A2-202ENST00000310645 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 CD300LBA8K4G0 201 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 SYNGR3O43761 229 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 IGHV3-9P01782 118 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 RAB35Q15286 201 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 CST9LP1Q5W188 147 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF295-AS1Q8N0V1 137 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 RBM14Q96PK6 669 aaKnown RBP12.56□□□□□ -0.4
COL6A2-202ENST00000310645 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 OR8B8Q15620 311 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 FGFBP3Q8TAT2 258 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 OR4C12Q96R67 309 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 CDCA3Q99618 268 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-202ENST00000310645 ERRFI1Q9UJM3 462 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-202ENST00000310645 M0R143 59 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 F2RP25116 425 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 WNT5AP41221 380 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 MEF2BQ02080 365 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-202ENST00000310645 ASCL4Q6XD76 172 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 ADGRG7Q96K78 797 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 OR6C1Q96RD1 312 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 OR51I2Q9H344 312 aa12.56□□□□□ -0.4
COL6A2-202ENST00000310645 AKIRIN1Q9H9L7 192 aaPredicted RBP12.56□□□□□ -0.4
COL6A2-202ENST00000310645 EXPH5Q8NEV8 1989 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 IGKV1-6A0A0C4DH72 117 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 A6NNC1 897 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 HS3ST1O14792 307 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 SYNGR2O43760 224 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 IQCJQ1A5X6 159 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF525Q8N782 197 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 TSTD1Q8NFU3 115 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 MBD3L1Q8WWY6 194 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 RDH5Q92781 318 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 DOCK7Q96N67 2140 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 PSG4Q00888 419 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 PMP22Q01453 160 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 BATFQ16520 125 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 BTNL3Q6UXE8 466 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-202ENST00000310645 ZIC4Q8N9L1 334 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 OR2T10Q8NGZ9 312 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 MRPL30Q8TCC3 161 aaKnown RBP12.55□□□□□ -0.4
COL6A2-202ENST00000310645 SGCZQ96LD1 299 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 RAB40CQ96S21 281 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 P2RX4Q99571 388 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 PARLQ9H300 379 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 FKBP11Q9NYL4 201 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 DEFA4P12838 97 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 GPM6AP51674 278 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 DAZAP2Q15038 168 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-202ENST00000310645 CYP2G1PQ6ZSU1 146 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 OR5D13Q8NGL4 314 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 CLEC1BQ9P126 229 aa12.55□□□□□ -0.4
COL6A2-202ENST00000310645 COL5A1P20908 1838 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms