RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PCSK4Q6UW60 755 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 OR1L8Q8NGR8 309 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 SH2D2AQ9NP31 389 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 CCL28Q9NRJ3 127 aa9.25□□□□□ -0.93
SYNPO2-201ENST00000307142 HBZP02008 142 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 NQO2P16083 231 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF90Q03938 601 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 STARD4Q96DR4 205 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 OR2W1Q9Y3N9 320 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF705GA8MUZ8 300 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 FAM3AP98173 230 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 CTHRC1Q96CG8 243 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 GAB2Q9UQC2 676 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 CNOT1A5YKK6 2376 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 C9orf170A2RU37 121 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 CDK2AP1O14519 115 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 SFT2D2O95562 160 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 MPV17P39210 176 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 OR8I2Q8N0Y5 310 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 OR4D10Q8NGI6 311 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 TMED6Q8WW62 240 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 RAB18Q9NP72 206 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 SNRNP200O75643 2136 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF727A8MUV8 499 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 SCAND1P57086 179 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 ERVFC1-1P60608 527 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 NCR3LG1Q68D85 454 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 UNQ9370/PRO34162Q6UXP9 181 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 RBPMSQ93062 196 aaKnown RBP9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 TMEM54Q969K7 222 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 MARC2Q969Z3 335 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 MSRB2Q9Y3D2 182 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 NEUROG3Q9Y4Z2 214 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 SEC14L6B5MCN3 397 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 TTRP02766 147 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 IGLV3-21P80748 117 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 BATFQ16520 125 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 SLC25A53Q5H9E4 307 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 ABHD12Q8N2K0 398 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 BVESQ8NE79 360 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 HDHD3Q9BSH5 251 aaPredicted RBP9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 CABLES2Q9BTV7 478 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 IDI2-AS1Q9NZ38 188 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 ZIC3O60481 467 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 SCGB1D1O95968 90 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 RIPPLY2Q5TAB7 128 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 GCSAMQ8N6F7 178 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 SDK2Q58EX2 2172 aa9.24□□□□□ -0.93
SYNPO2-201ENST00000307142 CHST1O43916 411 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 PPYP01298 95 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 FGF9P31371 208 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 FGF12P61328 243 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 H3F3CQ6NXT2 135 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 ABHD14BQ96IU4 210 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GPA33Q99795 319 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 WDR61Q9GZS3 305 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 MTFP1Q9UDX5 166 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF318Q5VUA4 2279 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 C20orf202A1L168 122 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 UNQ5815/PRO19632Q6UWF5 114 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 C16orf82Q7Z2V1 217 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 LILRB1Q8NHL6 650 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 PRDM14Q9GZV8 571 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 E9PLN8 166 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 CA11O75493 328 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 PPP1R1AQ13522 171 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 SSX1Q16384 188 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 BAK1Q16611 211 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 CXorf66Q5JRM2 361 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GLDNQ6ZMI3 551 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 RXFP4Q8TDU9 374 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 VKORC1Q9BQB6 163 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GAR1Q9NY12 217 aaKnown RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 WASHC3Q9Y3C0 194 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 IGHV1-2P23083 117 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 PNKDQ8N490 385 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 RPS4Y2Q8TD47 263 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF418Q8TF45 676 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 MRGPRFQ96AM1 343 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 MS4A10Q96PG2 267 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 WNT5BQ9H1J7 359 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 C7orf69Q9H7B7 122 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 TRBV5-3A0A0A0MS03 114 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 OR4C45A6NMZ5 311 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 ZNF708P17019 499 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GLRXP35754 106 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 MMP16P51512 607 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GGNBP1Q5YKI7 109 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 PDPNQ86YL7 162 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 OR5C1Q8NGR4 320 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GP6Q9HCN6 339 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 AUP1Q9Y679 476 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 PLXND1Q9Y4D7 1925 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 ANAPC1Q9H1A4 1944 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 J3QR06 171 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 WDR89Q96FK6 387 aaPredicted RBP9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GON7Q9BXV9 100 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
SYNPO2-201ENST00000307142 CECR9P0C854 216 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms