RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 ARL11Q969Q4 196 aa14.54□□□□□ -0.08
TMEM88-201ENST00000301599 MRPS24Q96EL2 167 aaKnown RBP14.54□□□□□ -0.08
TMEM88-201ENST00000301599 PGLYRP3Q96LB9 341 aa14.54□□□□□ -0.08
TMEM88-201ENST00000301599 FUNDC2Q9BWH2 189 aa14.54□□□□□ -0.08
TMEM88-201ENST00000301599 SPACA1Q9HBV2 294 aa14.54□□□□□ -0.08
TMEM88-201ENST00000301599 PSORS1C1Q9UIG5 152 aa14.54□□□□□ -0.08
TMEM88-201ENST00000301599 TRAV8-7A0A075B6U6 113 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 A0A1W2PPK0 400 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 TCRBV4S1A1TA0A5B7 111 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 MT-ND4P03905 459 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 CD1AP06126 327 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 FSTP19883 344 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 SSTR5P35346 364 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 GNG10P50151 68 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 TIMM50Q3ZCQ8 353 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 OR8H3Q8N146 312 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 JAGN1Q8N5M9 183 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 DRAM1Q8N682 238 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 OR14A2Q96R54 314 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 ACOT13Q9NPJ3 140 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 MRPS28Q9Y2Q9 187 aaKnown RBP14.53□□□□□ -0.08
TMEM88-201ENST00000301599 MOB4Q9Y3A3 225 aa14.53□□□□□ -0.08
TMEM88-201ENST00000301599 A0A1W2PP11 408 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 MCRIP1C9JLW8 97 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 MYL12BO14950 172 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 PLXNB1O43157 2135 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 ORC5O43913 435 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 SNRNP70P08621 437 aaKnown RBP14.52□□□□□ -0.09
TMEM88-201ENST00000301599 CELP19835 753 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 HES1Q14469 280 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 FBLN7Q53RD9 439 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 GLIPR1L1Q6UWM5 242 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 ZNF497Q6ZNH5 498 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 OR56B4Q8NH76 319 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 CCDC107Q8WV48 283 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 THRSPQ92748 146 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 PPP1R14BQ96C90 147 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 FKBP14Q9NWM8 211 aa14.52□□□□□ -0.09
TMEM88-201ENST00000301599 TSSC4Q9Y5U2 329 aaPredicted RBP14.52□□□□□ -0.09
TMEM88-201ENST00000301599 PNMA8CA0A1B0GUJ8 204 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 A0A1W2PRX2 142 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 SH2D7A6NKC9 451 aaPredicted RBP14.51□□□□□ -0.09
TMEM88-201ENST00000301599 C15orf65H3BRN8 121 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 MAS1P04201 325 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 GAPDHP04406 335 aaKnown RBP14.51□□□□□ -0.09
TMEM88-201ENST00000301599 CDK1P06493 297 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 TMEM11P17152 192 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 WNT4P56705 351 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 DOC2BQ14184 412 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 DIAPH2-AS1Q14236 149 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 HNF4GQ14541 408 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 TCTEX1D4Q5JR98 221 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 AHSA2Q719I0 299 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 REC114Q7Z4M0 266 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 NANOGP1Q8N7R0 232 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 WFDC9Q8NEX5 89 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 OR4X2Q8NGF9 303 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 DCUN1D5Q9BTE7 237 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 WDR12Q9GZL7 423 aaKnown RBP14.51□□□□□ -0.09
TMEM88-201ENST00000301599 RAB9BQ9NP90 201 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 ERGIC3Q9Y282 383 aa14.51□□□□□ -0.09
TMEM88-201ENST00000301599 A0A1W2PPE3 182 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 A0A1W2PPI3 338 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 AIPO00170 330 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 SDCBPO00560 298 aaPredicted RBP14.5□□□□□ -0.09
TMEM88-201ENST00000301599 PSMB9P28065 219 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 GP2P55259 537 aaKnown RBP14.5□□□□□ -0.09
TMEM88-201ENST00000301599 ZNF816Q0VGE8 651 aaPredicted RBP14.5□□□□□ -0.09
TMEM88-201ENST00000301599 OXLD1Q5BKU9 147 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 RNLSQ5VYX0 342 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 AWAT2Q6E213 333 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 ZNF367Q7RTV3 350 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 LINC00311Q8N616 119 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 C8orf31Q8N9H6 132 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 YIPF6Q96EC8 236 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 DERL3Q96Q80 235 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 A3GALT2U3KPV4 340 aa14.5□□□□□ -0.09
TMEM88-201ENST00000301599 NOTCH3Q9UM47 2321 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 FAM90A10PA6NDY2 464 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 FAM90A7PA6NKC0 464 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 FAM90A23PA8MXZ1 464 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 CCRL2O00421 344 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 PIN1P1O15428 100 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 FGF16O43320 207 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 GLAP06280 429 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 PF4V1P10720 104 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 CD33P20138 364 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 MAPK3P27361 379 aaPredicted RBP14.49□□□□□ -0.09
TMEM88-201ENST00000301599 LOXL3P58215 753 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 ZNF846Q147U1 533 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 Q3ZCU0 254 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 RAB12Q6IQ22 244 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 MOB3BQ86TA1 216 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 GFOD1Q9NXC2 390 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 ETAA1Q9NY74 926 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 RCC2Q9P258 522 aaKnown RBP14.49□□□□□ -0.09
TMEM88-201ENST00000301599 TRAPPC2LQ9UL33 140 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 PEX16Q9Y5Y5 336 aa14.49□□□□□ -0.09
TMEM88-201ENST00000301599 IGHV1-3A0A0C4DH29 117 aa14.48□□□□□ -0.09
TMEM88-201ENST00000301599 HSD17B6O14756 317 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms