RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 ELOA3CA0A087WX78 387 aaPredicted RBP10.03□□□□□ -0.8
PTPN4-201ENST00000263708 HYAL3O43820 417 aaPredicted RBP10.03□□□□□ -0.8
PTPN4-201ENST00000263708 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 A0A1W2PPE3 182 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 ZDHHC8Q9ULC8 765 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 PAQR9Q6ZVX9 377 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 FUNDC1Q8IVP5 155 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 GVQW1Q8N7I0 195 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 OR1L8Q8NGR8 309 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 FIZ1Q96SL8 496 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 GP1BAP07359 652 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 IL24Q13007 206 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 CLEC18BQ6UXF7 455 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 NT5CQ8TCD5 201 aa10.02□□□□□ -0.8
PTPN4-201ENST00000263708 MAGEA5P43359 124 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 RHBDD2Q6NTF9 364 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 CDIPTO14735 213 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 CDX2Q99626 313 aaPredicted RBP10.02□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF324BQ6AW86 544 aaPredicted RBP10.02□□□□□ -0.81
PTPN4-201ENST00000263708 TEPPQ6URK8 271 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 UNQ9370/PRO34162Q6UXP9 181 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 ISOC2Q96AB3 205 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 MRGPRFQ96AM1 343 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 TSPAN32Q96QS1 320 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 PIMREGQ9BSJ6 248 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 A0A0A6YYD5 115 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 MPC2O95563 127 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 GLULP15104 373 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 TRA2AQ13595 282 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPN4-201ENST00000263708 TMEM240Q5SV17 173 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.81
PTPN4-201ENST00000263708 ZFP64Q9NPA5 681 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 METTL12A8MUP2 240 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 PAGE4O60829 102 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 HYAL1Q12794 435 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 DOCK2Q92608 1830 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 SSC5DA1L4H1 1573 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 LY6EQ16553 131 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 FGF14Q92915 247 aa10.02□□□□□ -0.81
PTPN4-201ENST00000263708 ADRA2AP08913 450 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 SELENOPP49908 381 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 PNRC1Q12796 327 aaPredicted RBP10.01□□□□□ -0.81
PTPN4-201ENST00000263708 ST3GAL2Q16842 350 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF383Q8NA42 475 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 ALKBH7Q9BT30 221 aaPredicted RBP10.01□□□□□ -0.81
PTPN4-201ENST00000263708 CTAG2O75638 210 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 CDC20Q12834 499 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 AKAP6Q13023 2319 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 WDFY1Q8IWB7 410 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 GLRX2Q9NS18 164 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 VAX2Q9UIW0 290 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 SPATA45Q537H7 98 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 Q6ZS52 159 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 TEX101Q9BY14 249 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 C7orf71A4D174 169 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 HTN3P15516 51 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 AWAT1Q58HT5 328 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 TMEM136Q6ZRR5 245 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 SLC17A5Q9NRA2 495 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 PDCD11Q14690 1871 aaKnown RBP10.01□□□□□ -0.81
PTPN4-201ENST00000263708 ARRDC5A6NEK1 342 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 LILRA5A6NI73 299 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 GAPTQ8N292 157 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 EXOGQ9Y2C4 368 aaKnown RBP10.01□□□□□ -0.81
PTPN4-201ENST00000263708 MMP9P14780 707 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 HIKESHIQ53FT3 197 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 RTN4RL1Q86UN2 441 aaPredicted RBP10.01□□□□□ -0.81
PTPN4-201ENST00000263708 GPR82Q96P67 336 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 WNT16Q9UBV4 365 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 MPZL1O95297 269 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 PGLYRP4Q96LB8 373 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 CRYBG1Q9Y4K1 1723 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 PLCH1Q4KWH8 1693 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.01□□□□□ -0.81
PTPN4-201ENST00000263708 B4E171 279 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 J3QR06 171 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 IL4P05112 153 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 CTF1Q16619 201 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 GUCD1Q96NT3 240 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 NPFFR1Q9GZQ6 430 aa10.01□□□□□ -0.81
PTPN4-201ENST00000263708 NDUFB6O95139 128 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 HKR1P10072 659 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 C16orf47Q6ZP98 133 aaPredicted RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 ZNF707Q96C28 371 aaPredicted RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 RHNO1Q9BSD3 238 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 SLC25A37Q9NYZ2 338 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 TINAGQ9UJW2 476 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 SYNGR1O43759 233 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 FCGR2BP31994 310 aaPredicted RBP10□□□□□ -0.81
PTPN4-201ENST00000263708 NEU1Q99519 415 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 CCL19Q99731 98 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 OR8B12Q8NGG6 310 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 PTP4A1Q93096 173 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 IGHV5-51A0A0C4DH38 117 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 ETHE1O95571 254 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 DAOP14920 347 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 ERVFRD-1P60508 538 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 IGLV3-10A0A075B6K4 115 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 TMEM95Q3KNT9 176 aa10□□□□□ -0.81
PTPN4-201ENST00000263708 HSPB7Q9UBY9 170 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms