RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 IMMP1LQ96LU5 166 aa15.36■□□□□ 0.05
TRAF4-201ENST00000262395 GPR35Q9HC97 309 aa15.36■□□□□ 0.05
TRAF4-201ENST00000262395 ERRFI1Q9UJM3 462 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-201ENST00000262395 KIAA1549Q9HCM3 1950 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 C1orf87Q8N0U7 546 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 SIRT7Q9NRC8 400 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 HBE1P02100 147 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 SERPINE2P07093 398 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 FOXG1P55316 489 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-201ENST00000262395 B3GALT5-AS1P59052 145 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 SRYQ05066 204 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 GGNQ86UU5 652 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 OR8G5Q8NG78 346 aa15.35■□□□□ 0.05
TRAF4-201ENST00000262395 TSTD3H0UI37 97 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 CNOT4O95628 575 aaKnown RBP15.34■□□□□ 0.05
TRAF4-201ENST00000262395 NAPSAO96009 420 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 BAXQ07812 192 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 IL24Q13007 206 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 DNASE2BQ8WZ79 361 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 PLK3Q9H4B4 646 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 C5orf49A4QMS7 147 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 TGIF2LXQ8IUE1 241 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 SCGB1C1Q8TD33 95 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 CABLES2Q9BTV7 478 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 DCAF16Q9NXF7 216 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 CACNG5Q9UF02 275 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 PPP1R3CQ9UQK1 317 aa15.34■□□□□ 0.05
TRAF4-201ENST00000262395 IGHV3-64DA0A0J9YX35 117 aa15.33■□□□□ 0.05
TRAF4-201ENST00000262395 BCL2P10415 239 aa15.33■□□□□ 0.05
TRAF4-201ENST00000262395 F2RP25116 425 aa15.33■□□□□ 0.05
TRAF4-201ENST00000262395 CLDN15P56746 228 aa15.33■□□□□ 0.05
TRAF4-201ENST00000262395 POM121Q96HA1 1249 aa15.33■□□□□ 0.05
TRAF4-201ENST00000262395 PACRGQ96M98 296 aaPredicted RBP15.33■□□□□ 0.05
TRAF4-201ENST00000262395 ZNF576Q9H609 170 aa15.33■□□□□ 0.05
TRAF4-201ENST00000262395 CLDN34H7C241 214 aa15.33■□□□□ 0.04
TRAF4-201ENST00000262395 KLF7O75840 302 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-201ENST00000262395 NGFP01138 241 aa15.33■□□□□ 0.04
TRAF4-201ENST00000262395 ZFP36L1Q07352 338 aaKnown RBP15.33■□□□□ 0.04
TRAF4-201ENST00000262395 OR1A1Q9P1Q5 309 aa15.33■□□□□ 0.04
TRAF4-201ENST00000262395 PTBP3O95758 552 aaKnown RBP15.33■□□□□ 0.04
TRAF4-201ENST00000262395 CLN3Q13286 438 aa15.33■□□□□ 0.04
TRAF4-201ENST00000262395 ADIRFQ15847 76 aa15.33■□□□□ 0.04
TRAF4-201ENST00000262395 SF3B5Q9BWJ5 86 aaKnown RBP15.33■□□□□ 0.04
TRAF4-201ENST00000262395 ZNF552Q9H707 407 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-201ENST00000262395 TRAPPC2LH3BP13 241 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 CEACAM1P13688 526 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 RPS16P62249 146 aaKnown RBP15.32■□□□□ 0.04
TRAF4-201ENST00000262395 OR5D13Q8NGL4 314 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 GAB2Q9UQC2 676 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 A0A1B0GU03 582 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 LILRA1O75019 489 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 TUSC2O75896 110 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 C21orf62-AS1Q17RA5 79 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 KRTAP27-1Q3LI81 207 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 PCSK4Q6UW60 755 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 RCC1LQ96I51 464 aaKnown RBP15.32■□□□□ 0.04
TRAF4-201ENST00000262395 RBM14Q96PK6 669 aaKnown RBP15.32■□□□□ 0.04
TRAF4-201ENST00000262395 HIST1H2BLQ99880 126 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 PRRG4Q9BZD6 226 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 RBKSQ9H477 322 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 NBEAQ8NFP9 2946 aa15.32■□□□□ 0.04
TRAF4-201ENST00000262395 PRRC2CQ9Y520 2896 aaKnown RBP15.31■□□□□ 0.04
TRAF4-201ENST00000262395 GJE1A6NN92 205 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 H0Y980 276 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 PHOX2AO14813 284 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 TCAPO15273 167 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 MMP7P09237 267 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-201ENST00000262395 EPHA8P29322 1005 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-201ENST00000262395 FGF12P61328 243 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 SPANXN5Q5MJ07 72 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 PCED1AQ9H1Q7 454 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 PSENENQ9NZ42 101 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 WASF3Q9UPY6 502 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 RBM7Q9Y580 266 aaKnown RBP15.31■□□□□ 0.04
TRAF4-201ENST00000262395 ATP23Q9Y6H3 246 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 CLEC18AA5D8T8 446 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 ZNF503-AS2A6NEH8 195 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 DFFBO76075 338 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 P04436 131 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 PCBD1P61457 104 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 PKIAP61925 76 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 ARF1P84077 181 aaKnown RBP15.31■□□□□ 0.04
TRAF4-201ENST00000262395 MRPL21Q7Z2W9 205 aaKnown RBP15.31■□□□□ 0.04
TRAF4-201ENST00000262395 HAPLN4Q86UW8 402 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 CLEC18CQ8NCF0 446 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 SDF2L1Q9HCN8 221 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 DOCK11Q5JSL3 2073 aa15.31■□□□□ 0.04
TRAF4-201ENST00000262395 LOC102723996A0A087X1L8 192 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 CYB5R3P00387 301 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-201ENST00000262395 IGKV1-39P01597 117 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 IGKV1D-39P04432 117 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 SNRPCP09234 159 aaKnown RBP15.3■□□□□ 0.04
TRAF4-201ENST00000262395 ERVS71-1P61550 626 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 FOXO1Q12778 655 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 TESK1Q15569 626 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 OR8G2PQ6IF36 304 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 H1FOOQ8IZA3 346 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-201ENST00000262395 OR10J5Q8NHC4 309 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 RPUSD4Q96CM3 377 aaKnown RBP15.3■□□□□ 0.04
TRAF4-201ENST00000262395 SGCZQ96LD1 299 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms