RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 PTTG2Q9NZH5 202 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 KCNIP1Q9NZI2 227 aa11.54□□□□□ -0.56
VPS25-201ENST00000253794 SONP18583 2426 aaKnown RBP11.54□□□□□ -0.56
VPS25-201ENST00000253794 MXRA5Q9NR99 2828 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 MEX3AA1L020 520 aaKnown RBP11.53□□□□□ -0.56
VPS25-201ENST00000253794 TRDCB7Z8K6 153 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 CTDSPLO15194 276 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 MMP23AO75900 390 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 HBZP02008 142 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 PTBP1P26599 531 aaKnown RBP eCLIP11.53□□□□□ -0.56
VPS25-201ENST00000253794 S100A5P33763 92 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 PRSS3P35030 304 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 GDNFP39905 211 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 ETV6P41212 452 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 KIR2DS4P43632 304 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 LOXL3P58215 753 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 MRPS10P82664 201 aaKnown RBP11.53□□□□□ -0.56
VPS25-201ENST00000253794 KIR2DS1Q14954 304 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 TUSC1Q2TAM9 212 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 KLF17Q5JT82 389 aaPredicted RBP11.53□□□□□ -0.56
VPS25-201ENST00000253794 LY6G6FQ5SQ64 297 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 PYHIN1Q6K0P9 492 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 C9orf139Q6ZV77 190 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 C8orf31Q8N9H6 132 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 OR11H6Q8NGC7 330 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 GPX8Q8TED1 209 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 DIRAS2Q96HU8 199 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 ABHD1Q96SE0 405 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 PCGF1Q9BSM1 259 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 TMEM133Q9H2Q1 129 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 HEXA-AS1Q9H8Q6 139 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
VPS25-201ENST00000253794 CENPVL3A0A0U1RRI6 287 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 RNASEK-C17orf49H0YIS7 233 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 LPLP06858 475 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 NAT1P18440 290 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 HNF1AP20823 631 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 UBE2E1P51965 193 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 GUCA2AQ02747 115 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 STEAP3Q658P3 488 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 HOGA1Q86XE5 327 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 DTX3Q8N9I9 347 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 OR4A4PQ8NGN8 299 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 OR13D1Q8NGV5 346 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 NANPQ8TBE9 248 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 ZNF596Q8TC21 504 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 CABLES2Q9BTV7 478 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 TOLLIPQ9H0E2 274 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 JPT1Q9UK76 154 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 V9GYH0 126 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 NAV3Q8IVL0 2385 aa11.52□□□□□ -0.57
VPS25-201ENST00000253794 TEP1Q99973 2627 aaKnown RBP11.51□□□□□ -0.57
VPS25-201ENST00000253794 MEIOCA2RUB1 952 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 ODF3BA8MYP8 253 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 PTHLHP12272 177 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 OMGP23515 440 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 ZNF626Q68DY1 528 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 ZNF782Q6ZMW2 699 aaPredicted RBP11.51□□□□□ -0.57
VPS25-201ENST00000253794 OR1L1Q8NH94 360 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 RFESDQ8TAC1 157 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 GALMQ96C23 342 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 ZNF286AQ9HBT8 521 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 GFOD1Q9NXC2 390 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 ZNF230Q9UIE0 474 aaPredicted RBP11.51□□□□□ -0.57
VPS25-201ENST00000253794 KIAA2026Q5HYC2 2103 aa11.51□□□□□ -0.57
VPS25-201ENST00000253794 IGHV2-26A0A0B4J1V2 119 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 IGHV1-69DA0A0B4J2H0 117 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 IGKV1-6A0A0C4DH72 117 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 FABP12A6NFH5 140 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 GABARAPH6UMI1 98 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 FABP7O15540 132 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 IGHV1-69P01742 117 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 SSBP1Q04837 148 aaKnown RBP11.5□□□□□ -0.57
VPS25-201ENST00000253794 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 MIDNQ504T8 468 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 GPR157Q5UAW9 335 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 SNX29P2Q8IUI4 249 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 LINC00311Q8N616 119 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 BEND2Q8NDZ0 799 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 SMIM4Q8WVI0 70 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 GCDHQ92947 438 aaPredicted RBP11.5□□□□□ -0.57
VPS25-201ENST00000253794 SNAPC3Q92966 411 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 LHX4Q969G2 390 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 CLEC7AQ9BXN2 247 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 ANXA10Q9UJ72 324 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
VPS25-201ENST00000253794 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
VPS25-201ENST00000253794 FN1P02751 2386 aaKnown RBP11.5□□□□□ -0.57
VPS25-201ENST00000253794 IGKV1D-8A0A087WSZ0 117 aa11.49□□□□□ -0.57
VPS25-201ENST00000253794 TRBV6-7A0A0A0MS04 114 aa11.49□□□□□ -0.57
VPS25-201ENST00000253794 INAFM1C9JVW0 142 aa11.49□□□□□ -0.57
VPS25-201ENST00000253794 SDCBPO00560 298 aaPredicted RBP11.49□□□□□ -0.57
VPS25-201ENST00000253794 ITGB1BP1O14713 200 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms