RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 HRASP01112 189 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 IGKV1D-12P01611 117 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 CST2P09228 141 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 RPL23P62829 140 aaKnown RBP15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 PRSS8Q16651 343 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 ACOT6Q3I5F7 207 aaPredicted RBP15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 BTNL3Q6UXE8 466 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 ASCL4Q6XD76 172 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF799Q96GE5 643 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 WFIKKN1Q96NZ8 548 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 PLSCR2Q9NRY7 297 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 TAAR3PQ9P1P4 343 aa15.18■□□□□ 0.02
CDKN1B-201ENST00000228872 A0A1W2PPQ1 181 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 M0QZK8 103 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 GGCTO75223 188 aaKnown RBP15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 CER1O95813 267 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 IFNA1P01562 189 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF41P51814 821 aaPredicted RBP15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF295-AS1Q8N0V1 137 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 OSR2Q8N2R0 312 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 SCGB1C1Q8TD33 95 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 THAP3Q8WTV1 239 aaPredicted RBP15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 MRGPRX4Q96LA9 322 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 ASCC3Q8N3C0 2202 aaKnown RBP15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 IGHV3-20A0A0C4DH32 117 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 PDCD6O75340 191 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 KBTBD11O94819 623 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 SP9P0CG40 484 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 FBLP22087 321 aaKnown RBP15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 UCP1P25874 307 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 OTX1P32242 354 aaPredicted RBP15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 OR3A1P47881 315 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 RPL29P47914 159 aaKnown RBP15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 PCP4P48539 62 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 PLPPR5Q32ZL2 321 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF774Q6NX45 483 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 GUSBP11Q6P575 273 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF818PQ6ZRF7 136 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 GAPTQ8N292 157 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 MUC3AQ02505 3323 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 CFAP54Q96N23 3096 aa15.17■□□□□ 0.02
CDKN1B-201ENST00000228872 RTP5Q14D33 572 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 ACSF3Q4G176 576 aaPredicted RBP15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 TMEM211Q6ICI0 200 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF573Q86YE8 665 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 NAGKQ9UJ70 344 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 ST3GAL6Q9Y274 331 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 LRRC3CA6NJW4 275 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 PATE3B3GLJ2 98 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 MDH2P40926 338 aaKnown RBP15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 MALLQ13021 153 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 SLC25A53Q5H9E4 307 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 OR2AE1Q8NHA4 323 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 OR6C3Q9NZP0 311 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 RNF150Q9ULK6 438 aa15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 MRPS18CQ9Y3D5 142 aaKnown RBP15.16■□□□□ 0.02
CDKN1B-201ENST00000228872 DMDP11532 3685 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 MAP1LC3B2A6NCE7 125 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF737O75373 536 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 LINC00614P0C842 121 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 CNN3Q15417 329 aaKnown RBP15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 TRIM61Q5EBN2 209 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 PSMG3Q9BT73 122 aaPredicted RBP15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 MAP1LC3BQ9GZQ8 125 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 RTTNQ86VV8 2226 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 GUCA1AP43080 201 aaPredicted RBP15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 PRSS12P56730 875 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 CLDN17P56750 224 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 FOXL2P58012 376 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF705AQ6ZN79 300 aaPredicted RBP15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 RPUSD4Q96CM3 377 aaKnown RBP15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 BORCS8Q96FH0 119 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 OR51I2Q9H344 312 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 ZNF442Q9H7R0 627 aa15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 NCOA6Q14686 2063 aaPredicted RBP15.15■□□□□ 0.02
CDKN1B-201ENST00000228872 TLX3O43711 291 aaPredicted RBP15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 OR10J1P30954 320 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 CNN1P51911 297 aaKnown RBP15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 MRPL52Q86TS9 123 aaKnown RBP15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 OR2T10Q8NGZ9 312 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 KMT2EQ8IZD2 1858 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 TYMSP04818 313 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 HIST1H3AP68431 136 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 PHYHD1Q5SRE7 291 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 FAM180AQ6UWF9 173 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 LHFPL2Q6ZUX7 228 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 CISD2Q8N5K1 135 aaKnown RBP15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 FGF21Q9NSA1 209 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 KLRF1Q9NZS2 232 aa15.14■□□□□ 0.01
CDKN1B-201ENST00000228872 A0A0G2JRQ6 117 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 A0A1B0GX78 115 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 TP53I11O14683 189 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 TCN2P20062 427 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 MRPS11P82912 194 aaKnown RBP15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 MEF2BQ02080 365 aaPredicted RBP15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 TMEM41BQ5BJD5 291 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 SHISA6Q6ZSJ9 500 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 ZNF525Q8N782 197 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 NABP1Q96AH0 204 aa15.13■□□□□ 0.01
CDKN1B-201ENST00000228872 ZNF501Q96CX3 271 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms