RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 BGLAPP02818 100 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 CELA2AP08217 269 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 OR8D4Q8NGM9 314 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 EID2BQ96D98 161 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 GUCD1Q96NT3 240 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 DHRS7CA6NNS2 312 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 PF4P02776 101 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 CTF1Q16619 201 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF721Q8TF20 911 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 OR2V2Q96R30 315 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 MIEN1Q9BRT3 115 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 Q9N2K0 584 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 MPV17LQ2QL34 196 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 CLRN3Q8NCR9 226 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 BVESQ8NE79 360 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 DCTN5Q9BTE1 182 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 OR2W1Q9Y3N9 320 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 SMPD2O60906 423 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 RNASE1P07998 156 aaKnown RBP11.56□□□□□ -0.56
COL1A1-201ENST00000225964 GABRA6Q16445 453 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 CLEC18BQ6UXF7 455 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 OR1N2Q8NGR9 330 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 CHAC2Q8WUX2 184 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 GAPDHP04406 335 aaKnown RBP11.56□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM255AQ5JRV8 349 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 DUX5Q96PT3 197 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 LYRM2Q9NU23 88 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-201ENST00000225964 RAB29O14966 203 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 CXorf1O96002 111 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 FGF9P31371 208 aaPredicted RBP11.56□□□□□ -0.56
COL1A1-201ENST00000225964 BHLHA9Q7RTU4 235 aa11.56□□□□□ -0.56
COL1A1-201ENST00000225964 MVDP53602 400 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 TCTAP57738 103 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 SSX1Q16384 188 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 TEPPQ6URK8 271 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 SEZ6L2Q6UXD5 910 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 ADAD2Q8NCV1 583 aaKnown RBP11.55□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM204Q9BSN7 226 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 BCORQ6W2J9 1755 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 APCSP02743 223 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 GZMKP49863 264 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 CD300LDQ6UXZ3 194 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 MSRB3Q8IXL7 192 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 PACRGQ96M98 296 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-201ENST00000225964 PRO1933Q9H354 126 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 PLXNB2O15031 1838 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 ARAP2Q8WZ64 1704 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 CDRT15L2A8MXV6 281 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF324O75467 553 aaPredicted RBP11.55□□□□□ -0.56
COL1A1-201ENST00000225964 LDLRAD3Q86YD5 345 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 PTX4Q96A99 478 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF385AQ96PM9 386 aaKnown RBP11.55□□□□□ -0.56
COL1A1-201ENST00000225964 HSPB8Q9UJY1 196 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 RPL29P47914 159 aaKnown RBP11.55□□□□□ -0.56
COL1A1-201ENST00000225964 UCP2P55851 309 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 SMUG1Q53HV7 270 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 SHISA5Q8N114 240 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 TPRX1Q8N7U7 411 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 MIA3Q5JRA6 1907 aa11.55□□□□□ -0.56
COL1A1-201ENST00000225964 TCRBV16S1A1N1A0A5B0 115 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF735P0CB33 412 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 ATP5J2P56134 94 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 HIST3H3Q16695 136 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 SSX8Q7RTT4 187 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 PAXXQ9BUH6 204 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 IL17BQ9UHF5 180 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 NKX2-6A6NCS4 301 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 RGS13O14921 159 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 PEBP1P30086 187 aaKnown RBP11.54□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM50BP56557 158 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 B2MP61769 119 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 ELOBQ15370 118 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 SIAH2O43255 324 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 TAS2R60P59551 318 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM191AQ9H0A3 160 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 B4E171 279 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 PAGE4O60829 102 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 HOXD4P09016 255 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-201ENST00000225964 TSPAN7P41732 249 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 RTN4RQ9BZR6 473 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 CYB5R3P00387 301 aaPredicted RBP11.54□□□□□ -0.56
COL1A1-201ENST00000225964 LRRC75BQ2VPJ9 315 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 BSXQ3C1V8 233 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 LRRC75AQ8NAA5 344 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 OR4A5Q8NH83 315 aa11.54□□□□□ -0.56
COL1A1-201ENST00000225964 KLF7O75840 302 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 DDB2Q92466 427 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 HDHD3Q9BSH5 251 aaPredicted RBP11.53□□□□□ -0.56
COL1A1-201ENST00000225964 PRSS50Q9UI38 385 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 A0A1B0GU03 582 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 A0A1W2PS18 150 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 WNT9BO14905 357 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 IL11P20809 199 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM78Q5T7P6 136 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 FOXB2Q5VYV0 432 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 UNQ5815/PRO19632Q6UWF5 114 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 OR4D11Q8NGI4 311 aa11.53□□□□□ -0.56
COL1A1-201ENST00000225964 ITLN1Q8WWA0 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms