RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 ZNF222Q9UK12 451 aa14.47□□□□□ -0.09
PHGDH-234ENST00000642041 FLVCR2Q9UPI3 526 aa14.47□□□□□ -0.09
PHGDH-234ENST00000642041 LRRC30A6NM36 301 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 LILRA1O75019 489 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 OR2A4O95047 310 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 THBDP07204 575 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 CD3EP07766 207 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 IRF2P14316 349 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 ANXA7P20073 488 aaKnown RBP14.46□□□□□ -0.09
PHGDH-234ENST00000642041 CD83Q01151 205 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 FCN2Q15485 313 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 CLEC12BQ2HXU8 276 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 PAN3Q58A45 887 aaKnown RBP14.46□□□□□ -0.09
PHGDH-234ENST00000642041 BEX5Q5H9J7 111 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 NCMAPQ5T1S8 102 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 ZNF880Q6PDB4 577 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 SLC38A6Q8IZM9 456 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 C1orf87Q8N0U7 546 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 GAPTQ8N292 157 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 OR2Z1Q8NG97 314 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 OR5D13Q8NGL4 314 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 ELMOD3Q96FG2 381 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 WFIKKN1Q96NZ8 548 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 OR2A7Q96R45 310 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 KCNIP1Q9NZI2 227 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 TAAR3PQ9P1P4 343 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 POU2F3Q9UKI9 436 aa14.46□□□□□ -0.09
PHGDH-234ENST00000642041 MGAM2Q2M2H8 2515 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 PKD1L1Q8TDX9 2849 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 ATP6V1G2-DDX39BF2Z307 99 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 BOLA2-SMG1P6H3BVE0 249 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 ABCD4O14678 606 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 CSN2P05814 226 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 GZMKP49863 264 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 HERV-K104P61576 105 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 SLC35E4Q6ICL7 350 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 Q6P435 159 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 WDR82Q6UXN9 313 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 ACP7Q6ZNF0 438 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 TMED4Q7Z7H5 227 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 SGPP2Q8IWX5 399 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 OR2AK2Q8NG84 335 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 Q8TCH9 128 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 MITD1Q8WV92 249 aa14.45□□□□□ -0.1
PHGDH-234ENST00000642041 RANGRFQ9HD47 186 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-234ENST00000642041 SVEP1Q4LDE5 3571 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 SRRM5B3KS81 715 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 NPIPB11E5RHQ5 1161 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 F5H5P2 479 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 FABP7O15540 132 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 OR2H2O95918 312 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 HAND1O96004 215 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 HLA-AP01891 365 aaKnown RBP14.44□□□□□ -0.1
PHGDH-234ENST00000642041 CD34P28906 385 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 APOBEC3AP31941 199 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-234ENST00000642041 SRPXP78539 464 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 EFNB3Q15768 340 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 ALKBH6Q3KRA9 238 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 C6orf183Q5T699 404 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 Q6ZR03 302 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 MEGF10Q96KG7 1140 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 ZNF2Q9BSG1 426 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-234ENST00000642041 MGAT4CQ9UBM8 478 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 WIPI2Q9Y4P8 454 aa14.44□□□□□ -0.1
PHGDH-234ENST00000642041 hCG_1807616A0A1W2PRN6 198 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 TMEM30CPA0ZSE6 113 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 DPRXA6NFQ7 191 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 B9A039 149 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 RHBDL1O75783 438 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 SLC22A5O76082 557 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 HPXP02790 462 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 PGAM2P15259 253 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 ZBTB25P24278 435 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 TNFAIP6P98066 277 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-234ENST00000642041 DHRS2Q13268 280 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 ABCA11PQ4W5N1 156 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 KCTD9Q7L273 389 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 WDR86Q86TI4 376 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 C11orf53Q8IXP5 236 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 MARCH1Q8TCQ1 289 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 MOB3AQ96BX8 217 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 HS3ST6Q96QI5 342 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 DNTTIP1Q9H147 329 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 TMEM165Q9HC07 324 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 ZFP57Q9NU63 452 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 C1orf123Q9NWV4 160 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 RNF7Q9UBF6 113 aa14.43□□□□□ -0.1
PHGDH-234ENST00000642041 TRAV24A0A0B4J272 114 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 C9orf170A2RU37 121 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 FAM172BPA6NC97 362 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 OR2AT4A6NND4 320 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 M0R233 179 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 SLC33A1O00400 549 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-234ENST00000642041 SFT2D2O95562 160 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 ZNF728P0DKX0 622 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 VSIG10L2P0DP72 767 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 MUC1P15941 1255 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-234ENST00000642041 GZMHP20718 246 aa14.42□□□□□ -0.1
PHGDH-234ENST00000642041 LOXP28300 417 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-234ENST00000642041 SERPINF1P36955 418 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms