RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SYT7O43581 403 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 FCN3O75636 299 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 DHRS3O75911 302 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF205O95201 554 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 DUS4LO95620 317 aaKnown RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 CYB5R3P00387 301 aaPredicted RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TGFAP01135 160 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MSMBP08118 114 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 NMBP08949 121 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 IRF2P14316 349 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 SRD5A1P18405 259 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 CXCL2P19875 107 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 ANXA7P20073 488 aaKnown RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 VAMP1P23763 118 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 CD34P28906 385 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MDH2P40926 338 aaKnown RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 SOX2P48431 317 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 IL13RA1P78552 427 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 PRDX4Q13162 271 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 OR8G1Q15617 311 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 UBE2V2Q15819 145 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF260Q3ZCT1 412 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 VAX1Q5SQQ9 334 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 AVPI1Q5T686 147 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 C11orf87Q6NUJ2 197 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 FAM122CQ6P4D5 195 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MOB3CQ70IA8 216 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 DOK3Q7L591 496 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MOGAT3Q86VF5 341 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 LYPD6Q86Y78 171 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 BPIFB2Q8N4F0 458 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 PNLDC1Q8NA58 520 aaKnown RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 BVESQ8NE79 360 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 PXT1Q8NFP0 134 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 OR51S1Q8NGJ8 323 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 OR5M8Q8NGP6 311 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 OR13C3Q8NGS6 347 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 OR11L1Q8NGX0 322 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TERB2Q8NHR7 220 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 COQ8AQ8NI60 647 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 OR5P3Q8WZ94 311 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 PIGCQ92535 297 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM186Q96B77 213 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MSI2Q96DH6 328 aaKnown RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TECTBQ96PL2 329 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 ADAT1Q9BUB4 502 aaKnown RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 GSX1Q9H4S2 264 aaPredicted RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF665Q9H7R5 613 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 ZMAT3Q9HA38 289 aaKnown RBP4.39□□□□□ -1.71
SHMT1-211ENST00000618902 RAB18Q9NP72 206 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 YAE1D1Q9NRH1 226 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 GPR173Q9NS66 373 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM106BQ9NUM4 274 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 UFSP2Q9NUQ7 469 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 DNAJB11Q9UBS4 358 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MIOXQ9UGB7 285 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 FLVCR2Q9UPI3 526 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 PIGLQ9Y2B2 252 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MPC1Q9Y5U8 109 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 POMT1Q9Y6A1 747 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 TENM1Q9UKZ4 2725 aa4.39□□□□□ -1.71
SHMT1-211ENST00000618902 MGAM2Q2M2H8 2515 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 FBN3Q75N90 2809 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TRAV8-7A0A075B6U6 113 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 A0A0B4J203 849 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF816-ZNF321PA0A0X1KG74 233 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 LOC105371267A0A1B0GV96 52 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 LRP5LA4QPB2 252 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM210A6NLX4 147 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 ANKRD30BLA7E2S9 258 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 SERPINE3A8MV23 424 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 INAFM1C9JVW0 142 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TMEM178BH3BS89 294 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 RAB27BO00194 218 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TNFRSF13BO14836 293 aaPredicted RBP4.38□□□□□ -1.71
SHMT1-211ENST00000618902 ARPC5O15511 151 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 MTRF1O75570 445 aaKnown RBP4.38□□□□□ -1.71
SHMT1-211ENST00000618902 IGHV2-70P01814 119 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 IGHV2-5P01817 119 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TFF1P04155 84 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CD3DP04234 171 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 AMY2AP04746 511 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 MUC1P15941 1255 aaPredicted RBP4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CTRB1P17538 263 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 AMY2BP19961 511 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 PSMB6P28072 239 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CD80P33681 288 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 GNALP38405 381 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CLDN12P56749 244 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 H2BFSP57053 126 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 TAS2R46P59540 309 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 LMO4P61968 165 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 ZNF154Q13106 437 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 MADCAM1Q13477 382 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 FAM76BQ5HYJ3 339 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 NKAPLQ5M9Q1 402 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 CTRB2Q6GPI1 263 aa4.38□□□□□ -1.71
SHMT1-211ENST00000618902 COMMD2Q86X83 199 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms