RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PNLIPRP2P54317 469 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 SMAGPQ0VAQ4 97 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 LRRC10Q5BKY1 277 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 HES3Q5TGS1 186 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 MRPL24Q96A35 216 aaKnown RBP7.7□□□□□ -1.18
CSMD1-216ENST00000602557 CLEC5AQ9NY25 188 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 TMED3Q9Y3Q3 217 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 CLDN16Q9Y5I7 305 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 F5H697 171 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 TNFSF15O95150 251 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 HLA-GP17693 338 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 FUT3P21217 361 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 NIT1Q86X76 327 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 IGLV3-25P01717 112 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 WDFY1Q8IWB7 410 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 SSMEM1Q8WWF3 244 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 PARLQ9H300 379 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 SPRY3O43610 288 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 GOSR1O95249 250 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 LINC01465Q8N7H1 131 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 LRRC75AQ8NAA5 344 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 C14orf144Q96I85 54 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 CITED1Q99966 193 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 PSME4Q14997 1843 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 HIST1H1DP16402 221 aaKnown RBP7.69□□□□□ -1.18
CSMD1-216ENST00000602557 S100A4P26447 101 aaKnown RBP7.69□□□□□ -1.18
CSMD1-216ENST00000602557 CEACAM6P40199 344 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 KLRB1Q12918 225 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 IRF3Q14653 427 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 Q5BKY6 102 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 SLC25A34Q6PIV7 304 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 MTURNQ8N3F0 131 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 C3orf85A0A1B0GTC6 90 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF785A8K8V0 405 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF205O95201 554 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.69□□□□□ -1.18
CSMD1-216ENST00000602557 MEGF9Q9H1U4 602 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 CYR61O00622 381 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 METAP1P53582 386 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 FAM53BQ14153 422 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 SGMS2Q8NHU3 365 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 TNFSF18Q9UNG2 199 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 OR2Y1Q8NGV0 311 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 TRAV39A0A0B4J263 110 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 NKX2-6A6NCS4 301 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 SLC25A17O43808 307 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 C1orf185Q5T7R7 199 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 TMEM136Q6ZRR5 245 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 USF3Q68DE3 2245 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 SP1P08047 785 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 ZBTB25P24278 435 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 ARF6P62330 175 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 CCL7P80098 99 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 Q7L0L9 218 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 FAM169BQ8N8A8 192 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 TMEM147Q9BVK8 224 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 QSER1Q2KHR3 1735 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 TRGC1P0CF51 173 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 HOXA6P31267 233 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 SRP14P37108 136 aaKnown RBP7.69□□□□□ -1.18
CSMD1-216ENST00000602557 OPRK1P41145 380 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 OR2V1Q8NHB1 315 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 SARAFQ96BY9 339 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 ALX4Q9H161 411 aaPredicted RBP7.69□□□□□ -1.18
CSMD1-216ENST00000602557 PARP14Q460N5 1801 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 RER1O15258 196 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 CEACAM5P06731 702 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 PGA3P0DJD8 388 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 CD1BP29016 333 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 B4GALNT1Q00973 533 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 IL24Q13007 206 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF774Q6NX45 483 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 OR1N2Q8NGR9 330 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
CSMD1-216ENST00000602557 PRSS23O95084 383 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 BCL2P10415 239 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 LDLRAD2Q5SZI1 272 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 OR4C45A6NMZ5 311 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 PP6455Q8WZ26 134 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 LRRC61Q9BV99 259 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 RPL34P49207 117 aaKnown RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 SLC25A1P53007 311 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 MRPL58Q14197 206 aaKnown RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 TM4SF20Q53R12 229 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 KLF7O75840 302 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 TFPI2P48307 235 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 CCR5P51681 352 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 LSM11P83369 360 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF345Q14585 488 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 SLC25A42Q86VD7 318 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 TGIF2LYQ8IUE0 185 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 BEX4Q9NWD9 120 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.68□□□□□ -1.18
CSMD1-216ENST00000602557 GLRX5Q86SX6 157 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 OR10S1Q8NGN2 331 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 OR5AC2Q9NZP5 309 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 PLXNB1O43157 2135 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 TRGV8A0A0C4DH27 118 aa7.68□□□□□ -1.18
CSMD1-216ENST00000602557 MOSPD3O75425 235 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms