RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 DPCDQ9BVM2 203 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 METTL9Q9H1A3 318 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 MRPS18AQ9NVS2 196 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 ERVK13-1Q9NX77 482 aa14.05□□□□□ -0.16
SHKBP1-227ENST00000602011 IGHV1-3A0A0C4DH29 117 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 TMEM30CPA0ZSE6 113 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 NCBP2LA6PVI3 153 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 CCL24O00175 119 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 HSPB6O14558 160 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 TXNL1O43396 289 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 CSTBP04080 98 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 FOXE3Q13461 319 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 MPV17LQ2QL34 196 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 ZFP1Q6P2D0 407 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 MOB3BQ86TA1 216 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 RNF152Q8N8N0 203 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 OR5M8Q8NGP6 311 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 EAF1Q96JC9 268 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 TMEM138Q9NPI0 162 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 ST3GAL6Q9Y274 331 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 RPL36Q9Y3U8 105 aaKnown RBP14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 GMPPBQ9Y5P6 360 aa14.04□□□□□ -0.16
SHKBP1-227ENST00000602011 GABRPO00591 440 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 HTR3BO95264 441 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 GABRB1P18505 474 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 GNG10P50151 68 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 GPR176Q14439 515 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 ZSCAN26Q16670 478 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 UTF1Q5T230 341 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 STEAP3Q658P3 488 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 RPL22L1Q6P5R6 122 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 SUMF2Q8NBJ7 301 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 OR52N1Q8NH53 320 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 LEAP2Q969E1 77 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 PDCD1LG2Q9BQ51 273 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 DCLRE1BQ9H816 532 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 ISG20L2Q9H9L3 353 aaKnown RBP14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 SPACA1Q9HBV2 294 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 ZNF580Q9UK33 172 aa14.03□□□□□ -0.16
SHKBP1-227ENST00000602011 EI24O14681 340 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 OR7C1O76099 320 aaPredicted RBP14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 MOSP00540 346 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 IGHV3-7P01780 117 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 OR5H8P0DN80 308 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 SSTR5P35346 364 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 GPR12P47775 334 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 PPP3R1P63098 170 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 GPR50Q13585 617 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 LTC4SQ16873 150 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 STX19Q8N4C7 294 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 Q8N6K4 173 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 PLPPR1Q8TBJ4 325 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 ARL11Q969Q4 196 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 RASL11BQ9BPW5 248 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 FAM192AQ9GZU8 254 aa14.02□□□□□ -0.17
SHKBP1-227ENST00000602011 ZNF93P35789 620 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 DIAPH2-AS1Q14236 149 aa14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 PIGYQ3MUY2 71 aa14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 ZIK1Q3SY52 487 aaPredicted RBP14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 ST6GALNAC6Q969X2 333 aa14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 MRPS24Q96EL2 167 aaKnown RBP14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 GFOD1Q9NXC2 390 aa14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 ING4Q9UNL4 249 aa14.01□□□□□ -0.17
SHKBP1-227ENST00000602011 E9PI62 339 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 C15orf65H3BRN8 121 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 SDCBPO00560 298 aaPredicted RBP14□□□□□ -0.17
SHKBP1-227ENST00000602011 GTF2F2P13984 249 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 INSL3P51460 131 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 RBM11P57052 281 aaKnown RBP14□□□□□ -0.17
SHKBP1-227ENST00000602011 LPCAT4Q643R3 524 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 TMPRSS11AQ6ZMR5 421 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 Q8N9W7 124 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 OR51A2Q8NGJ7 313 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 RTN4IP1Q8WWV3 396 aaPredicted RBP14□□□□□ -0.17
SHKBP1-227ENST00000602011 PYDC1Q8WXC3 89 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 RAX2Q96IS3 184 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 C9orf16Q9BUW7 83 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 LINC00527Q9UJ94 153 aa14□□□□□ -0.17
SHKBP1-227ENST00000602011 IRGMA1A4Y4 181 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 SPINT2O43291 252 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 CA11O75493 328 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 IGHG4P01861 327 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 MT-ND4P03905 459 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 IGF1P05019 195 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 VDAC1P21796 283 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 BDKRB2P30411 391 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 SOX6P35712 828 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 ZNF137PP52743 207 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 TRAT1Q6PIZ9 186 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 LCNL1Q6ZST4 164 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 CBR4Q8N4T8 237 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 TMEM104Q8NE00 496 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 OR52I1Q8NGK6 324 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 OR10K1Q8NGX5 313 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 TFAP2CQ92754 450 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 TMEM106AQ96A25 262 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 S1PR3Q99500 378 aa13.99□□□□□ -0.17
SHKBP1-227ENST00000602011 PLSCR3Q9NRY6 295 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms