RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 IL13RA1P78552 427 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 MRPS11P82912 194 aaKnown RBP17.32■□□□□ 0.36
PNKP-203ENST00000593946 TLE4Q04727 773 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 METTL11BQ5VVY1 283 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 FAM216BQ8N7L0 139 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 TPRX1Q8N7U7 411 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 MED30Q96HR3 178 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 NEURL2Q9BR09 285 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 TMPRSS13Q9BYE2 586 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 DLL4Q9NR61 685 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 ZNF221Q9UK13 617 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 PCDHB10Q9UN67 800 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 GPR132Q9UNW8 380 aa17.32■□□□□ 0.36
PNKP-203ENST00000593946 NKX6-3A6NJ46 265 aa17.31■□□□□ 0.36
PNKP-203ENST00000593946 FSTL3O95633 263 aa17.31■□□□□ 0.36
PNKP-203ENST00000593946 CLDN1O95832 211 aa17.31■□□□□ 0.36
PNKP-203ENST00000593946 ECI1P42126 302 aa17.31■□□□□ 0.36
PNKP-203ENST00000593946 EDDM3AQ14507 147 aa17.31■□□□□ 0.36
PNKP-203ENST00000593946 SURF2Q15527 256 aaPredicted RBP17.31■□□□□ 0.36
PNKP-203ENST00000593946 TMED4Q7Z7H5 227 aa17.31■□□□□ 0.36
PNKP-203ENST00000593946 TAF9BQ9HBM6 251 aa17.31■□□□□ 0.36
PNKP-203ENST00000593946 DOCK11Q5JSL3 2073 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 BET1O15155 118 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 DIRAS3O95661 229 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 P2RX3P56373 397 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 TMEM185AQ8NFB2 350 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 CAPSLQ8WWF8 208 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 KIRREL1Q96J84 757 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 SCGB3A2Q96PL1 93 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 SEC22CQ9BRL7 303 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 OR51J1Q9H342 316 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 NCOR1P1Q9H4R4 102 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 TRBV6-7A0A0A0MS04 114 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 ODAMA1E959 279 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 C12orf77C9JDV5 145 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 NPIPB11E5RHQ5 1161 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 TMPRSS2O15393 492 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 TRAPPC2P0DI81 140 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 TRAPPC2BP0DI82 140 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 NFYAP23511 347 aaPredicted RBP17.3■□□□□ 0.36
PNKP-203ENST00000593946 ERP29P30040 261 aaKnown RBP17.3■□□□□ 0.36
PNKP-203ENST00000593946 CBX3Q13185 183 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 C6orf183Q5T699 404 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 CRYBG3Q68DQ2 2970 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 ZNF554Q86TJ5 538 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 SLC25A42Q86VD7 318 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 OR13A1Q8NGR1 328 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 MOB3AQ96BX8 217 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 FXYD6Q9H0Q3 95 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 C5orf66Q9H5L9 145 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 PLEKHF2Q9H8W4 249 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 KCNIP1Q9NZI2 227 aa17.3■□□□□ 0.36
PNKP-203ENST00000593946 HMX3A6NHT5 357 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 TUSC2O75896 110 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 LY6HO94772 140 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 PLA2G2AP14555 144 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 RRAS2P62070 204 aaPredicted RBP17.29■□□□□ 0.36
PNKP-203ENST00000593946 BAMBIQ13145 260 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 KCNJ8Q15842 424 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 DRAXINQ8NBI3 349 aaPredicted RBP17.29■□□□□ 0.36
PNKP-203ENST00000593946 MRGPRDQ8TDS7 321 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 DACT3Q96B18 629 aaPredicted RBP17.29■□□□□ 0.36
PNKP-203ENST00000593946 LURAP1Q96LR2 239 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 TMEM246Q9BRR3 403 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 CLEC4MQ9H2X3 399 aaPredicted RBP17.29■□□□□ 0.36
PNKP-203ENST00000593946 GPN1Q9HCN4 374 aaPredicted RBP17.29■□□□□ 0.36
PNKP-203ENST00000593946 KAAG1Q9UBP8 84 aa17.29■□□□□ 0.36
PNKP-203ENST00000593946 SNRPGP15A8MWD9 76 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 NDUFA2O43678 99 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 PPYP01298 95 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 OR4E1P0C645 316 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 DAOP14920 347 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 AADACP22760 399 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 CDKN1AP38936 164 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 CR1LQ2VPA4 569 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 ZNF626Q68DY1 528 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 FAHD2BQ6P2I3 314 aaPredicted RBP17.28■□□□□ 0.36
PNKP-203ENST00000593946 TRAT1Q6PIZ9 186 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 PRR18Q8N4B5 295 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 OR10J5Q8NHC4 309 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 IL1F10Q8WWZ1 152 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 FAHD2AQ96GK7 314 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 RTBDNQ9BSG5 229 aaPredicted RBP17.28■□□□□ 0.36
PNKP-203ENST00000593946 USP9YO00507 2555 aaPredicted RBP17.28■□□□□ 0.36
PNKP-203ENST00000593946 TENM4Q6N022 2769 aa17.28■□□□□ 0.36
PNKP-203ENST00000593946 IGHV2-70P01814 119 aa17.27■□□□□ 0.36
PNKP-203ENST00000593946 EDDM3BP56851 147 aa17.27■□□□□ 0.36
PNKP-203ENST00000593946 ADAD2Q8NCV1 583 aaKnown RBP17.27■□□□□ 0.36
PNKP-203ENST00000593946 OR52B4Q8NGK2 314 aa17.27■□□□□ 0.36
PNKP-203ENST00000593946 IGFBPL1Q8WX77 278 aa17.27■□□□□ 0.36
PNKP-203ENST00000593946 DCTN5Q9BTE1 182 aa17.27■□□□□ 0.36
PNKP-203ENST00000593946 OVOL3O00110 214 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 CREBL2O60519 120 aaPredicted RBP17.27■□□□□ 0.35
PNKP-203ENST00000593946 FCN3O75636 299 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 PGAM2P15259 253 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 UCP3P55916 312 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 HERV-K104P61576 105 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 C4orf46Q504U0 113 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 LYPD2Q6UXB3 125 aa17.27■□□□□ 0.35
PNKP-203ENST00000593946 H1FOOQ8IZA3 346 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 473.4 ms