RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 DGCR2P98153 550 aa10.8□□□□□ -0.68
HDAC5-208ENST00000588419 MRPL28Q13084 256 aaKnown RBP10.8□□□□□ -0.68
HDAC5-208ENST00000588419 OR52I1Q8NGK6 324 aa10.8□□□□□ -0.68
HDAC5-208ENST00000588419 RGP1Q92546 391 aaPredicted RBP10.8□□□□□ -0.68
HDAC5-208ENST00000588419 ORAI1Q96D31 301 aa10.8□□□□□ -0.68
HDAC5-208ENST00000588419 RAX2Q96IS3 184 aa10.8□□□□□ -0.68
HDAC5-208ENST00000588419 EAF1Q96JC9 268 aaPredicted RBP10.8□□□□□ -0.68
HDAC5-208ENST00000588419 WWC2-AS2Q96NR7 200 aa10.8□□□□□ -0.68
HDAC5-208ENST00000588419 PRR25Q96S07 402 aa10.8□□□□□ -0.68
HDAC5-208ENST00000588419 H0YHG0 523 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 CCL24O00175 119 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 AP4M1O00189 453 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 GEMIN2O14893 280 aaKnown RBP10.79□□□□□ -0.68
HDAC5-208ENST00000588419 GABRB1P18505 474 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 IL3RAP26951 378 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 ZNF93P35789 620 aaPredicted RBP10.79□□□□□ -0.68
HDAC5-208ENST00000588419 GPR12P47775 334 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 ZNF816Q0VGE8 651 aaPredicted RBP10.79□□□□□ -0.68
HDAC5-208ENST00000588419 RAB40BQ12829 278 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 DCTN2Q13561 401 aaKnown RBP10.79□□□□□ -0.68
HDAC5-208ENST00000588419 CXorf66Q5JRM2 361 aaPredicted RBP10.79□□□□□ -0.68
HDAC5-208ENST00000588419 TEX38Q6PEX7 206 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 PRR18Q8N4B5 295 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 COMMD1Q8N668 190 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 OR10A7Q8NGE5 316 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 OR2T10Q8NGZ9 312 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 OR52N1Q8NH53 320 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 GPR148Q8TDV2 347 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 TMEM106AQ96A25 262 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 Q96MT0 163 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 P2RX4Q99571 388 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 RASL11BQ9BPW5 248 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 COL7A1Q02388 2944 aa10.79□□□□□ -0.68
HDAC5-208ENST00000588419 A0A1W2PP11 408 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 H3BNX3 289 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 AIPO00170 330 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 SLC31A2O15432 143 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 MPZL2O60487 215 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 VDAC1P21796 283 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 MYF6P23409 242 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 SLC6A1P30531 599 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 GPR50Q13585 617 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 SLC22A6Q4U2R8 563 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 XAF1Q6GPH4 301 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 TGIF2LXQ8IUE1 241 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 IZUMO1Q8IYV9 350 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 OR10V1Q8NGI7 309 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 OR13C5Q8NGS8 318 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 OR8U1Q8NH10 309 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 NCOR1P1Q9H4R4 102 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
HDAC5-208ENST00000588419 GFOD1Q9NXC2 390 aa10.78□□□□□ -0.68
HDAC5-208ENST00000588419 RPL36Q9Y3U8 105 aaKnown RBP10.78□□□□□ -0.68
HDAC5-208ENST00000588419 KMT2CQ8NEZ4 4911 aaKnown RBP10.78□□□□□ -0.68
HDAC5-208ENST00000588419 ZNF736B4DX44 427 aaPredicted RBP10.77□□□□□ -0.69
HDAC5-208ENST00000588419 RRP9O43818 475 aaKnown RBP10.77□□□□□ -0.69
HDAC5-208ENST00000588419 BDKRB2P30411 391 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 ECI1P42126 302 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 PNLIPRP3Q17RR3 467 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 OR2G6Q5TZ20 316 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 SLC16A12Q6ZSM3 486 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 STX19Q8N4C7 294 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 Q8N9W7 124 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 OR5M8Q8NGP6 311 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 OR4K15Q8NH41 348 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 RTN4IP1Q8WWV3 396 aaPredicted RBP10.77□□□□□ -0.69
HDAC5-208ENST00000588419 HSPB9Q9BQS6 159 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 C9orf16Q9BUW7 83 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 GON7Q9BXV9 100 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 ABCG5Q9H222 651 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 DCLRE1BQ9H816 532 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 LINC00574Q9H8X3 128 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 TMEM138Q9NPI0 162 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 GNG12Q9UBI6 72 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 TRAPPC2LQ9UL33 140 aa10.77□□□□□ -0.69
HDAC5-208ENST00000588419 LOC100130705A0A1B0GUX0 176 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 SEC14L6B5MCN3 397 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 LY86O95711 162 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 MOSP00540 346 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 LIMS3P0CW19 117 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 LIMS4P0CW20 117 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 SLC2A2P11168 524 aaPredicted RBP10.76□□□□□ -0.69
HDAC5-208ENST00000588419 GZMHP20718 246 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 PAX5Q02548 391 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 RIPK1Q13546 671 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 SMN1Q16637 294 aaKnown RBP10.76□□□□□ -0.69
HDAC5-208ENST00000588419 KLHL22Q53GT1 634 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 C9orf66Q5T8R8 295 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 ZNF529Q6P280 563 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 ZFP1Q6P2D0 407 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 RPL22L1Q6P5R6 122 aaKnown RBP10.76□□□□□ -0.69
HDAC5-208ENST00000588419 LINC00596Q86U02 117 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 APH1BQ8WW43 257 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 S1PR3Q99500 378 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 ZNF184Q99676 751 aaPredicted RBP10.76□□□□□ -0.69
HDAC5-208ENST00000588419 ASCL2Q99929 193 aa10.76□□□□□ -0.69
HDAC5-208ENST00000588419 PAK1IP1Q9NWT1 392 aaPredicted RBP10.76□□□□□ -0.69
HDAC5-208ENST00000588419 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
HDAC5-208ENST00000588419 MAGEA13PA6NCF6 341 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms