RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 RSPO3Q9BXY4 272 aaPredicted RBP4.84□□□□□ -1.64
LINC01538-201ENST00000588074 NECAP2Q9NVZ3 263 aa4.84□□□□□ -1.64
LINC01538-201ENST00000588074 CISD1Q9NZ45 108 aaKnown RBP4.84□□□□□ -1.64
LINC01538-201ENST00000588074 NXT1Q9UKK6 140 aaKnown RBP4.84□□□□□ -1.64
LINC01538-201ENST00000588074 WDR90Q96KV7 1748 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 PARP14Q460N5 1801 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 CACNA1SQ13698 1873 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 OR4C45A6NMZ5 311 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ANKRD30BLA7E2S9 258 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 KIR2DS3K7RE56 304 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 VENTXO95231 258 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 CLDN1O95832 211 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 PRNPP04156 253 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 MEF2BQ02080 365 aaPredicted RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 KIR2DS3Q14952 304 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ZNF788Q6ZQV5 615 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 METTL27Q8N6F8 245 aaPredicted RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 OR4C16Q8NGL9 310 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 KCNG3Q8TAE7 436 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 RNF183Q96D59 192 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ZMYND19Q96E35 227 aaPredicted RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 TRIB3Q96RU7 358 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 P2RX4Q99571 388 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 EFCAB11Q9BUY7 163 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ULBP2Q9BZM5 246 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 POLR2J3Q9H1A7 115 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ZDHHC11Q9H8X9 412 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 MCTS1Q9ULC4 181 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 NOP16Q9Y3C1 178 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ETV7Q9Y603 341 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 PSMB11A5LHX3 300 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 SMIM9A6NGZ8 99 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 OR2T8A6NH00 312 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 RRHO14718 337 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 XRCC2O43543 280 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 B4GALT3O60512 393 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 FOXH1O75593 365 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 WISP3O95389 354 aaPredicted RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 CGAP01215 116 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 SRP19P09132 144 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ZNF286BP0CG31 522 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 CR2P20023 1033 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 UCNP55089 124 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 TAS2R20P59543 309 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ZNF92Q03936 586 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 EXOSC7Q15024 291 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 SLC25A35Q3KQZ1 300 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 SP5Q6BEB4 398 aaPredicted RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 MRPL54Q6P161 138 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 NHSQ6T4R5 1651 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 DPPA3Q6W0C5 159 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 LCNL1Q6ZST4 164 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 TSEN54Q7Z6J9 526 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 IQCF1Q8N6M8 205 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 OR5AR1Q8NGP9 310 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 CMTM2Q8TAZ6 248 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 MARCH1Q8TCQ1 289 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 STARD4Q96DR4 205 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 S100A16Q96FQ6 103 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 GRAMD2BQ96HH9 432 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 RCHY1Q96PM5 261 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 TRPM7Q96QT4 1865 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 DPY30Q9C005 99 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 STRADBQ9C0K7 418 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 VN1R1Q9GZP7 353 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 Q9N2K0 584 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 HINT3Q9NQE9 182 aaKnown RBP4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ZNF581Q9P0T4 197 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 KLK11Q9UBX7 282 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 MTFP1Q9UDX5 166 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 ICAM5Q9UMF0 924 aa4.83□□□□□ -1.64
LINC01538-201ENST00000588074 CHD3Q12873 2000 aaKnown RBP4.82□□□□□ -1.64
LINC01538-201ENST00000588074 NUP210LQ5VU65 1888 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 ITGB4P16144 1822 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 ARFGEF1Q9Y6D6 1849 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 TMEM89A2RUT3 159 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 PRSS46E5RG02 174 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 K7EP34 96 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 M0R1X1 148 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 IGHA1P01876 353 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 CSN3P07498 182 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 B4GALT1P15291 398 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 PYCR1P32322 319 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 OR3A4PP47883 348 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 ZNF83P51522 516 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 TMPRSS3P57727 454 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 FAM174BQ3ZCQ3 159 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 TCEAL5Q5H9L2 206 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 C12orf54Q6X4T0 127 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 LRP11Q86VZ4 500 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 POC1AQ8NBT0 407 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 JOSD2Q8TAC2 188 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 FGF11Q92914 225 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 IL22RA2Q969J5 263 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 DDIT4LQ96D03 193 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 NDFIP1Q9BT67 221 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 NPFFR1Q9GZQ6 430 aa4.82□□□□□ -1.64
LINC01538-201ENST00000588074 PHPT1Q9NRX4 125 aaPredicted RBP4.82□□□□□ -1.64
LINC01538-201ENST00000588074 FLRT3Q9NZU0 649 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms