RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 PSG11Q9UQ72 335 aa13.58□□□□□ -0.24
CDC42EP4-206ENST00000581014 LSM2Q9Y333 95 aaKnown RBP13.58□□□□□ -0.24
CDC42EP4-206ENST00000581014 AMMECR1Q9Y4X0 333 aaPredicted RBP13.58□□□□□ -0.24
CDC42EP4-206ENST00000581014 A0A1W2PP11 408 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 A0A1W2PPK0 400 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 FAM172BPA6NC97 362 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 FAM90A10PA6NDY2 464 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 FAM90A7PA6NKC0 464 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 FAM90A23PA8MXZ1 464 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 RGS10O43665 173 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 OR2F2O95006 317 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 NFYBP25208 207 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 MNDAP41218 407 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 HABP2Q14520 560 aaPredicted RBP13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 SPHARQ15513 63 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 GLIPR1L1Q6UWM5 242 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 ZNF497Q6ZNH5 498 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 GAPTQ8N292 157 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 JAGN1Q8N5M9 183 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 C8orf31Q8N9H6 132 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 MUL1Q969V5 352 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 RBM14Q96PK6 669 aaKnown RBP13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 OCSTAMPQ9BR26 566 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 ISYNA1Q9NPH2 558 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 GHRLQ9UBU3 117 aa13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 MRPS28Q9Y2Q9 187 aaKnown RBP13.57□□□□□ -0.24
CDC42EP4-206ENST00000581014 NOTCH3Q9UM47 2321 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 PNMA8CA0A1B0GUJ8 204 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 C15orf65H3BRN8 121 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 ORC5O43913 435 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 CA11O75493 328 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 MT-ND4P03905 459 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 MAS1P04201 325 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 GLAP06280 429 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 VSIG10L2P0DP72 767 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 SSTR5P35346 364 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 MADCAM1Q13477 382 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 Q3ZCU0 254 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 Q6ZS46 218 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 RFESDQ8TAC1 157 aa13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 YTHDF1Q9BYJ9 559 aaKnown RBP13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 PRKDCP78527 4128 aaKnown RBP13.56□□□□□ -0.24
CDC42EP4-206ENST00000581014 TGP01266 2768 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 M0QZK8 103 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 SC5DO75845 299 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 FAM106CPP0CH98 169 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 CD37P11049 281 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 RBM39Q14498 530 aaKnown RBP13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 ATAD3CQ5T2N8 411 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 LINC00311Q8N616 119 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 FAM110DQ8TAY7 271 aaPredicted RBP13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 PHYHIPQ92561 330 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 RPEQ96AT9 228 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 CNBD2Q96M20 576 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 SLC25A33Q9BSK2 321 aa13.55□□□□□ -0.24
CDC42EP4-206ENST00000581014 FBXO24O75426 580 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 OPN1MWP04001 364 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 AMY1AP04745 511 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 AMY2AP04746 511 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 OPN1MW2P0DN77 364 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 OPN1MW3P0DN78 364 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 CD24P25063 80 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 VDAC2P45880 294 aaPredicted RBP13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 RAB7AP51149 207 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 GP2P55259 537 aaKnown RBP13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 LOXL3P58215 753 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 GABARAPL2P60520 117 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 EMX1Q04741 257 aaPredicted RBP13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 TPBGQ13641 420 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 ACSM3Q53FZ2 586 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 AWAT2Q6E213 333 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 OR8H3Q8N146 312 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 C11orf44Q8N8P7 122 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 Q96M66 194 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 OR5M11Q96RB7 305 aa13.54□□□□□ -0.24
CDC42EP4-206ENST00000581014 TRAV39A0A0B4J263 110 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 A0A1W2PPI3 338 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 MCRIP1C9JLW8 97 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 UBBP0CG47 229 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 MGMTP16455 207 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 TMEM30BQ3MIR4 351 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 FBLN7Q53RD9 439 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 RAB12Q6IQ22 244 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 NDUFA11Q86Y39 141 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 TMEM104Q8NE00 496 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 CAPSLQ8WWF8 208 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 SGCDQ92629 289 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 LEAP2Q969E1 77 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 TOMM40LQ969M1 308 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 ARL11Q969Q4 196 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 RAB9BQ9NP90 201 aa13.53□□□□□ -0.24
CDC42EP4-206ENST00000581014 AIPO00170 330 aa13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 PEX14O75381 377 aa13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 CD28P10747 220 aa13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 FUT3P21217 361 aa13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 PSMA1P25786 263 aaKnown RBP13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 ZNF816Q0VGE8 651 aaPredicted RBP13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 MLLT11Q13015 90 aaPredicted RBP13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 MED22Q15528 200 aa13.52□□□□□ -0.25
CDC42EP4-206ENST00000581014 TRAM1Q15629 374 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms