RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 REC114Q7Z4M0 266 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 OR8H3Q8N146 312 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 DRAM1Q8N682 238 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 OR4X2Q8NGF9 303 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 OR10X1Q8NGY0 326 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 PGLYRP3Q96LB9 341 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 MOB4Q9Y3A3 225 aa12.63□□□□□ -0.39
CRLF3-203ENST00000578692 TRAV8-7A0A075B6U6 113 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 A0A1W2PPE3 182 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 A0A1W2PPI3 338 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 A0A1W2PPK0 400 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 MAGEA13PA6NCF6 341 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 EFCAB10A6NFE3 127 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 PF4V1P10720 104 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 CD33P20138 364 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 TAS2R43P59537 309 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 C10orf99Q6UWK7 81 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 NEK7Q8TDX7 302 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 CCDC107Q8WV48 283 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 SGCDQ92629 289 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 MYDGFQ969H8 173 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 ARL11Q969Q4 196 aa12.62□□□□□ -0.39
CRLF3-203ENST00000578692 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 PNMA8CA0A1B0GUJ8 204 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 C15orf65H3BRN8 121 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 ORC5O43913 435 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 MT-ND4P03905 459 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 TMEM11P17152 192 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 FSTP19883 344 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 CAPGP40121 348 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 HNF4GQ14541 408 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 RCN1Q15293 331 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 GLIPR1L1Q6UWM5 242 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 C8orf59Q8N0T1 100 aaPredicted RBP12.61□□□□□ -0.39
CRLF3-203ENST00000578692 JAGN1Q8N5M9 183 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 MUL1Q969V5 352 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 MRPS24Q96EL2 167 aaKnown RBP12.61□□□□□ -0.39
CRLF3-203ENST00000578692 OR14A2Q96R54 314 aa12.61□□□□□ -0.39
CRLF3-203ENST00000578692 CNOT2Q9NZN8 540 aaKnown RBP12.61□□□□□ -0.39
CRLF3-203ENST00000578692 MRPS28Q9Y2Q9 187 aaKnown RBP12.61□□□□□ -0.39
CRLF3-203ENST00000578692 MCRIP1C9JLW8 97 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 SDCBPO00560 298 aaPredicted RBP12.6□□□□□ -0.39
CRLF3-203ENST00000578692 IGKV1D-33P01593 117 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 IGKV1-33P01594 117 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 MAS1P04201 325 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 GAPDHP04406 335 aaKnown RBP12.6□□□□□ -0.39
CRLF3-203ENST00000578692 GNAO1P09471 354 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 ZNF816Q0VGE8 651 aaPredicted RBP12.6□□□□□ -0.39
CRLF3-203ENST00000578692 LAIR2Q6ISS4 152 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 ZNF497Q6ZNH5 498 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 MOB3BQ86TA1 216 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 CDH26Q8IXH8 852 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 STX19Q8N4C7 294 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 C5orf56Q8N8D9 126 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 UBALD1Q8TB05 177 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 PHF21AQ96BD5 680 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 SPACA1Q9HBV2 294 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 PLCXD1Q9NUJ7 323 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 PSORS1C1Q9UIG5 152 aa12.6□□□□□ -0.39
CRLF3-203ENST00000578692 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 AIPO00170 330 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 CCRL2O00421 344 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 HSD17B6O14756 317 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 FGF16O43320 207 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 PF4P02776 101 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 CD1AP06126 327 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 IGLL1P15814 213 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 CELP19835 753 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 WNT4P56705 351 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 LOXL3P58215 753 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 Q6ZPA2 131 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 LINC00311Q8N616 119 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 BPIFB6Q8NFQ5 453 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 DERL3Q96Q80 235 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 NECAP2Q9NVZ3 263 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 GFOD1Q9NXC2 390 aa12.59□□□□□ -0.39
CRLF3-203ENST00000578692 IGHV3-43A0A0B4J1X8 118 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 IGHV1-3A0A0C4DH29 117 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 MYL12BO14950 172 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 IGHV3-43DP0DP04 118 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 REG1BP48304 166 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 DOC2BQ14184 412 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 EBI3Q14213 229 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 SYT6Q5T7P8 510 aaPredicted RBP12.58□□□□□ -0.4
CRLF3-203ENST00000578692 OGFRL1Q5TC84 451 aaPredicted RBP12.58□□□□□ -0.4
CRLF3-203ENST00000578692 FOXB2Q5VYV0 432 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 AWAT2Q6E213 333 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 AHSA2Q719I0 299 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 NANOGP1Q8N7R0 232 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 C8orf31Q8N9H6 132 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 CHPT1Q8WUD6 406 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 FBLIM1Q8WUP2 373 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 BANF2Q9H503 90 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 ETAA1Q9NY74 926 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 RCC2Q9P258 522 aaKnown RBP12.58□□□□□ -0.4
CRLF3-203ENST00000578692 TRAPPC2LQ9UL33 140 aa12.58□□□□□ -0.4
CRLF3-203ENST00000578692 PEX16Q9Y5Y5 336 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms