RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 BCL2P10415 239 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 TLE4Q04727 773 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 TMEM267Q0VDI3 215 aaPredicted RBP14.04□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF787Q6DD87 383 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 ARL6IP6Q8N6S5 226 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 SSC4DQ8WTU2 575 aa14.04□□□□□ -0.16
LINC00554-201ENST00000564841 FRG2CA6NGY1 282 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 CHST1O43916 411 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 SLC6A8P48029 635 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 SLC25A24Q6NUK1 477 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 RBKSQ9H477 322 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 DECR2Q9NUI1 292 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 OCIAD1Q9NX40 245 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 B4E171 279 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 IFI6P09912 130 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 TSPAN7P41732 249 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 GALR1P47211 349 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 FAM3BP58499 235 aaPredicted RBP14.03□□□□□ -0.16
LINC00554-201ENST00000564841 TRIM61Q5EBN2 209 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 NUP54Q7Z3B4 507 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 UBALD2Q8IYN6 164 aa14.03□□□□□ -0.16
LINC00554-201ENST00000564841 RBMXL1Q96E39 390 aaKnown RBP14.03□□□□□ -0.16
LINC00554-201ENST00000564841 DIDO1Q9BTC0 2240 aaKnown RBP14.03□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF732B4DXR9 585 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 IGHMP01871 453 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 AADACP22760 399 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 TNFSF10P50591 281 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 PMS2CLQ68D20 193 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 UEVLDQ8IX04 471 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 MAML2Q8IZL2 1156 aaPredicted RBP14.02□□□□□ -0.16
LINC00554-201ENST00000564841 OR51G1Q8NGK1 321 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 CCDC74BQ96LY2 380 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 SMIM7Q9BQ49 75 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 LYRM2Q9NU23 88 aaPredicted RBP14.02□□□□□ -0.16
LINC00554-201ENST00000564841 NECAP2Q9NVZ3 263 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 TMEM242Q9NWH2 141 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 P4HTMQ9NXG6 502 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 ZNF407Q9C0G0 2248 aa14.02□□□□□ -0.16
LINC00554-201ENST00000564841 LRRC3CA6NJW4 275 aa14.02□□□□□ -0.17
LINC00554-201ENST00000564841 SIAH2O43255 324 aa14.02□□□□□ -0.17
LINC00554-201ENST00000564841 METTL15P1P0C7V9 234 aa14.02□□□□□ -0.17
LINC00554-201ENST00000564841 Q6ZPA2 131 aa14.02□□□□□ -0.17
LINC00554-201ENST00000564841 RNASE8Q8TDE3 154 aaKnown RBP14.02□□□□□ -0.17
LINC00554-201ENST00000564841 NAGKQ9UJ70 344 aa14.02□□□□□ -0.17
LINC00554-201ENST00000564841 TP53I11O14683 189 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 RRP8O43159 456 aaKnown RBP14.01□□□□□ -0.17
LINC00554-201ENST00000564841 BRS3P32247 399 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 TESK1Q15569 626 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 SPIN3Q5JUX0 258 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 SAP25Q8TEE9 199 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 PILRBQ9UKJ0 227 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 PAM16Q9Y3D7 125 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 IGHV5-10-1A0A0J9YXX1 117 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 TSPAN2O60636 221 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 OR2J2O76002 312 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 GABREP78334 506 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 PIGYQ3MUY2 71 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 COA6Q5JTJ3 125 aaKnown RBP14.01□□□□□ -0.17
LINC00554-201ENST00000564841 H1FNTQ75WM6 255 aaPredicted RBP14.01□□□□□ -0.17
LINC00554-201ENST00000564841 ZNF573Q86YE8 665 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 ZNF100Q8IYN0 542 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 PLPPR1Q8TBJ4 325 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 RIF1Q5UIP0 2472 aaKnown RBP14.01□□□□□ -0.17
LINC00554-201ENST00000564841 LCATP04180 440 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 EXT1Q16394 746 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 Q6ZVH6 145 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 GRINAQ7Z429 371 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 OR8G5Q8NG78 346 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 POC1BQ8TC44 478 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 GATAD1Q8WUU5 269 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 PGAM5Q96HS1 289 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 PRSS50Q9UI38 385 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 RARRES3Q9UL19 164 aa14.01□□□□□ -0.17
LINC00554-201ENST00000564841 UBE2J1Q9Y385 318 aaPredicted RBP14.01□□□□□ -0.17
LINC00554-201ENST00000564841 KIR2DL5BA0A0G2JN68 375 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 KIR2DL5BA0A0G2JPC4 375 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 C3orf85A0A1B0GTC6 90 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 ALG1L2C9J202 215 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 ZNHIT1O43257 154 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 PNRC1Q12796 327 aaPredicted RBP14□□□□□ -0.17
LINC00554-201ENST00000564841 KIR2DL5AQ8N109 375 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 LRTM2Q8N967 370 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 OR5L2Q8NGL0 311 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 SNIP1Q8TAD8 396 aaKnown RBP14□□□□□ -0.17
LINC00554-201ENST00000564841 PIGLQ9Y2B2 252 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 IGKV3D-11A0A0A0MRZ8 115 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 TRAPPC6AO75865 159 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 ARL6IP1Q15041 203 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 ZNF695Q8IW36 515 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 GBGT1Q8N5D6 347 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 IFI44Q8TCB0 444 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 TMEM170AQ8WVE7 144 aa14□□□□□ -0.17
LINC00554-201ENST00000564841 CISD1Q9NZ45 108 aaKnown RBP14□□□□□ -0.17
LINC00554-201ENST00000564841 H7BYZ3 331 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 DAP3P51398 398 aaKnown RBP13.99□□□□□ -0.17
LINC00554-201ENST00000564841 TAS2R30P59541 319 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 WDR74Q6RFH5 385 aaPredicted RBP13.99□□□□□ -0.17
LINC00554-201ENST00000564841 TOMM20LQ6UXN7 152 aa13.99□□□□□ -0.17
LINC00554-201ENST00000564841 GNPNAT1Q96EK6 184 aaPredicted RBP13.99□□□□□ -0.17
LINC00554-201ENST00000564841 MS4A10Q96PG2 267 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms