RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 HLA-GP17693 338 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 AADACP22760 399 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 GRNP28799 593 aaKnown RBP11.57□□□□□ -0.56
TPM1-215ENST00000558868 OR3A1P47881 315 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 CEBPDP49716 269 aaPredicted RBP11.57□□□□□ -0.56
TPM1-215ENST00000558868 BAMBIQ13145 260 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 ZNF672Q499Z4 452 aaPredicted RBP11.57□□□□□ -0.56
TPM1-215ENST00000558868 IGSF11Q5DX21 431 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 ZNF565Q8N9K5 539 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 ASCC1Q8N9N2 400 aaKnown RBP11.57□□□□□ -0.56
TPM1-215ENST00000558868 OR5D13Q8NGL4 314 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 TOMM40LQ969M1 308 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 TMEM204Q9BSN7 226 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 FXYD6Q9H0Q3 95 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
TPM1-215ENST00000558868 KCNIP3Q9Y2W7 256 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 ITPR3Q14573 2671 aa11.57□□□□□ -0.56
TPM1-215ENST00000558868 NBPF19A0A087WUL8 3843 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 IGKV1D-17A0A075B6S4 117 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 TRBV6-7A0A0A0MS04 114 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 TEX13DA0A0J9YY54 714 aaPredicted RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 MGST3O14880 152 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 TUSC2O75896 110 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 RGS11O94810 467 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 UBR5O95071 2799 aaPredicted RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 IFNA2P01563 188 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 RCC1P18754 421 aaPredicted RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 NFYAP23511 347 aaPredicted RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 S100GP29377 79 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 GABRA2P47869 451 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 FXYD4P59646 89 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 SNRPD2P62316 118 aaKnown RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 SNTB1Q13884 538 aaKnown RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 CDSNQ15517 529 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 HMGN3Q15651 99 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 KCNJ8Q15842 424 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 KRBOX4Q5JUW0 171 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 C20orf204Q6ZNR8 217 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 ZNF561Q8N587 486 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 CD177Q8N6Q3 437 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 CASTOR1Q8WTX7 329 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 ITLN2Q8WWU7 325 aaPredicted RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 TMEM230Q96A57 120 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 KIRREL1Q96J84 757 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 VRK1Q99986 396 aaPredicted RBP11.56□□□□□ -0.56
TPM1-215ENST00000558868 RSRP1Q9BUV0 290 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 TMPRSS13Q9BYE2 586 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 CHIAQ9BZP6 476 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 NCOR1P1Q9H4R4 102 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 OPN4Q9UHM6 478 aa11.56□□□□□ -0.56
TPM1-215ENST00000558868 CRYM-AS1A6NIL9 109 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 DEFB108AA8MXU0 73 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 PI3P19957 117 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 DNASE1P24855 282 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 CD80P33681 288 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 RBMXP38159 391 aaKnown RBP11.55□□□□□ -0.56
TPM1-215ENST00000558868 CCL8P80075 99 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 SPRNQ5BIV9 151 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 TEX36Q5VZQ5 186 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 CLEC18BQ6UXF7 455 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 OR5M8Q8NGP6 311 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 OR2T35Q8NGX2 323 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 ANGPTL6Q8NI99 470 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 NEUROG1Q92886 237 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 LURAP1Q96LR2 239 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 LIME1Q9H400 295 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 TAF9BQ9HBM6 251 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 RAB9BQ9NP90 201 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 KIF25Q9UIL4 384 aa11.55□□□□□ -0.56
TPM1-215ENST00000558868 IGHV3OR15-7A0A075B7D8 119 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 TRAV38-1A0A0B4J264 116 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 IGKV1-6A0A0C4DH72 117 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 NKX6-3A6NJ46 265 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 K7N7A8 449 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 LGALS8O00214 317 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 HSPA12AO43301 675 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 ZG16O60844 167 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 ZNF737O75373 536 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 CYB5R3P00387 301 aaPredicted RBP11.54□□□□□ -0.56
TPM1-215ENST00000558868 GZMHP20718 246 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 UQCRFS1P47985 274 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 NKX2-5P52952 324 aaPredicted RBP11.54□□□□□ -0.56
TPM1-215ENST00000558868 PIGPP57054 158 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 RND3P61587 244 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 AESQ08117 197 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 SRSF4Q08170 494 aaKnown RBP11.54□□□□□ -0.56
TPM1-215ENST00000558868 FGL1Q08830 312 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 HERPUD1Q15011 391 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 STUMQ69YW2 141 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 KCTD9Q7L273 389 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 H1FOOQ8IZA3 346 aaPredicted RBP11.54□□□□□ -0.56
TPM1-215ENST00000558868 MUC15Q8N387 334 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 GALMQ96C23 342 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 SUCNR1Q9BXA5 334 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 SLC5A7Q9GZV3 580 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 SHARPINQ9H0F6 387 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 FAM234AQ9H0X4 552 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms