RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TUSC1Q2TAM9 212 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 SPATA46Q5T0L3 261 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 IL17RELQ6ZVW7 336 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 LHFPL1Q86WI0 220 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 C1orf174Q8IYL3 243 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 OR5L1Q8NGL2 311 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 OR5H2Q8NGV7 314 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 OR10K1Q8NGX5 313 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 OR2AE1Q8NHA4 323 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 MRPS24Q96EL2 167 aaKnown RBP8.68□□□□□ -1.02
TPM1-212ENST00000558347 FAM71F1Q96KD3 344 aaPredicted RBP8.68□□□□□ -1.02
TPM1-212ENST00000558347 REPIN1Q9BWE0 567 aaKnown RBP8.68□□□□□ -1.02
TPM1-212ENST00000558347 TM2D1Q9BX74 207 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 CHODLQ9H9P2 273 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 TUBG2Q9NRH3 451 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 STARD10Q9Y365 291 aa8.68□□□□□ -1.02
TPM1-212ENST00000558347 C17orf100A8MU93 164 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 SERPINE3A8MV23 424 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 SOCS1O15524 211 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 TGFAP01135 160 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 NGFP01138 241 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 PMP2P02689 132 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 VAMP1P23763 118 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 MPV17P39210 176 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 LUMP51884 338 aaPredicted RBP8.67□□□□□ -1.02
TPM1-212ENST00000558347 TMEM50BP56557 158 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 MICBQ29980 383 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 GFOD2Q3B7J2 385 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 PAN3Q58A45 887 aaKnown RBP8.67□□□□□ -1.02
TPM1-212ENST00000558347 PLAC9Q5JTB6 97 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.67□□□□□ -1.025e-6■■■□□ 16.3
TPM1-212ENST00000558347 UNQ6126/PRO20091Q6UXV3 157 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 FBXW12Q6X9E4 464 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 ADAD2Q8NCV1 583 aaKnown RBP8.67□□□□□ -1.02
TPM1-212ENST00000558347 SEMA6DQ8NFY4 1073 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 MARCH1Q8TCQ1 289 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 RDH5Q92781 318 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 GPER1Q99527 375 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 NICN1Q9BSH3 213 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 ZNF471Q9BX82 626 aaPredicted RBP8.67□□□□□ -1.02
TPM1-212ENST00000558347 FN3KRPQ9HA64 309 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 CHMP1AQ9HD42 196 aaPredicted RBP8.67□□□□□ -1.02
TPM1-212ENST00000558347 GPR160Q9UJ42 338 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 CDC42EP3Q9UKI2 254 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 KCNS2Q9ULS6 477 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 COL6A5A8TX70 2615 aa8.67□□□□□ -1.02
TPM1-212ENST00000558347 CCSO14618 274 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 WNT9BO14905 357 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 FGF16O43320 207 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 CRTAPO75718 401 aaPredicted RBP8.66□□□□□ -1.02
TPM1-212ENST00000558347 IGHV3-13P01766 116 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 TPT1P13693 172 aaKnown RBP8.66□□□□□ -1.02
TPM1-212ENST00000558347 AKR1C4P17516 323 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 AMY2BP19961 511 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 PRKACBP22694 351 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 ACKR3P25106 362 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 PTGFRP43088 359 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 SELENOVP59797 346 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 CCL8P80075 99 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 SLC22A6Q4U2R8 563 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 TMEM42Q69YG0 159 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 TMEM104Q8NE00 496 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 SLC25A40Q8TBP6 338 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 CPNE2Q96FN4 548 aaPredicted RBP8.66□□□□□ -1.02
TPM1-212ENST00000558347 MARS2Q96GW9 593 aaKnown RBP8.66□□□□□ -1.02
TPM1-212ENST00000558347 SEC22AQ96IW7 307 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 OR2J1Q9GZK6 312 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 CHST5Q9GZS9 411 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 WDR13Q9H1Z4 485 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 MBD2Q9UBB5 411 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 DNAJB11Q9UBS4 358 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 PIGLQ9Y2B2 252 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 ANK2Q01484 3957 aa8.66□□□□□ -1.02
TPM1-212ENST00000558347 IGKV1-9A0A0C4DH69 117 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 C5orf51A6NDU8 294 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 FAM25EA8MYX2 175 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 F5H0A9 414 aaPredicted RBP8.65□□□□□ -1.02
TPM1-212ENST00000558347 FAM157CP0CG43 387 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 PET100P0DJ07 73 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 CPT2P23786 658 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 GPR6P46095 362 aaPredicted RBP8.65□□□□□ -1.02
TPM1-212ENST00000558347 MRPS11P82912 194 aaKnown RBP8.65□□□□□ -1.02
TPM1-212ENST00000558347 ARFRP1Q13795 201 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 ZNF273Q14593 569 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 KISS1Q15726 138 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 ZNF718Q3SXZ3 478 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 FAM120AOSQ5T036 256 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 MBNL2Q5VZF2 373 aaKnown RBP8.65□□□□□ -1.02
TPM1-212ENST00000558347 KCTD9Q7L273 389 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 MRPL21Q7Z2W9 205 aaKnown RBP8.65□□□□□ -1.02
TPM1-212ENST00000558347 CSNK2A3Q8NEV1 391 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 OR51T1Q8NGJ9 327 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 CLDND2Q8NHS1 167 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 KLF14Q8TD94 323 aaPredicted RBP8.65□□□□□ -1.02
TPM1-212ENST00000558347 CASTOR1Q8WTX7 329 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 EMG1Q92979 244 aaKnown RBP8.65□□□□□ -1.02
TPM1-212ENST00000558347 MARC2Q969Z3 335 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 ARHGAP5-AS1Q96IT6 56 aa8.65□□□□□ -1.02
TPM1-212ENST00000558347 C5orf66Q9H5L9 145 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms