RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 C5orf56Q8N8D9 126 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 NEK7Q8TDX7 302 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 CYGBQ8WWM9 190 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
SNX6-210ENST00000557341 BABAM2Q9NXR7 383 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 SIRT4Q9Y6E7 314 aaPredicted RBP11.25□□□□□ -0.61
SNX6-210ENST00000557341 TRBV5-5A0A0J9YX44 114 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 LALBAP00709 142 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 IGKV1D-33P01593 117 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 IGKV1-33P01594 117 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 GTF2F2P13984 249 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 IGFBP3P17936 291 aaPredicted RBP11.24□□□□□ -0.61
SNX6-210ENST00000557341 FSTP19883 344 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 GZMHP20718 246 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 ZNF816Q0VGE8 651 aaPredicted RBP11.24□□□□□ -0.61
SNX6-210ENST00000557341 GPR176Q14439 515 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 Q499Y3 187 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 SLC22A6Q4U2R8 563 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 ATAD3CQ5T2N8 411 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 DMKNQ6E0U4 476 aaPredicted RBP11.24□□□□□ -0.61
SNX6-210ENST00000557341 CHPT1Q8WUD6 406 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 GHSRQ92847 366 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 ORAI1Q96D31 301 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 TMEM80Q96HE8 168 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 C8orf4Q9NR00 106 aa11.24□□□□□ -0.61
SNX6-210ENST00000557341 CHCHD3Q9NX63 227 aaKnown RBP11.24□□□□□ -0.61
SNX6-210ENST00000557341 A0A1W2PP11 408 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 A0A1W2PPE3 182 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 MAGEA13PA6NCF6 341 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 AIPO00170 330 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 CCRL2O00421 344 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 SDCBPO00560 298 aaPredicted RBP11.23□□□□□ -0.61
SNX6-210ENST00000557341 DUS4LO95620 317 aaKnown RBP11.23□□□□□ -0.61
SNX6-210ENST00000557341 LRRC36Q1X8D7 754 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 STX19Q8N4C7 294 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 ZFP41Q8N8Y5 198 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 OR51D1Q8NGF3 324 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 OR52M1Q8NGK5 317 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 ARL11Q969Q4 196 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 PGLYRP3Q96LB9 341 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 SPACA1Q9HBV2 294 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
SNX6-210ENST00000557341 TRAV8-7A0A075B6U6 113 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 C15orf65H3BRN8 121 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 ORC5O43913 435 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 GPX5O75715 221 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 GAPDHP04406 335 aaKnown RBP11.22□□□□□ -0.61
SNX6-210ENST00000557341 IL3RAP26951 378 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 REG1BP48304 166 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 TAS2R43P59537 309 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 RPS11P62280 158 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNX6-210ENST00000557341 HNF4GQ14541 408 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 ZNF497Q6ZNH5 498 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 SLC35E3Q7Z769 313 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 ZNF329Q86UD4 541 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 FOXRED2Q8IWF2 684 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 IZUMO1Q8IYV9 350 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 JAGN1Q8N5M9 183 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 PACRGLQ8N7B6 248 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 C8orf31Q8N9H6 132 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 MRPS24Q96EL2 167 aaKnown RBP11.22□□□□□ -0.61
SNX6-210ENST00000557341 OR14A2Q96R54 314 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 RAB9BQ9NP90 201 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 GFOD1Q9NXC2 390 aa11.22□□□□□ -0.61
SNX6-210ENST00000557341 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
SNX6-210ENST00000557341 MRPS28Q9Y2Q9 187 aaKnown RBP11.22□□□□□ -0.61
SNX6-210ENST00000557341 IGHG2P01859 326 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 SLC6A1P30531 599 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 RPL23AP62750 156 aaKnown RBP11.21□□□□□ -0.61
SNX6-210ENST00000557341 SLC35B1P78383 322 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 Q3ZCU0 254 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 AWAT2Q6E213 333 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 MOB3BQ86TA1 216 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 DHRSXQ8N5I4 330 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 LINC00311Q8N616 119 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 ZNF485Q8NCK3 441 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 UBALD1Q8TB05 177 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 CCDC107Q8WV48 283 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 MUL1Q969V5 352 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 NOL4LQ96MY1 436 aaPredicted RBP11.21□□□□□ -0.61
SNX6-210ENST00000557341 GPR61Q9BZJ8 451 aa11.21□□□□□ -0.61
SNX6-210ENST00000557341 TRBV5-7A0A0A0MS05 114 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 IGHV3-43A0A0B4J1X8 118 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 IGHV3-72A0A0B4J1Y9 119 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 PNMA8CA0A1B0GUJ8 204 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 EFCAB10A6NFE3 127 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 MCRIP1C9JLW8 97 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 MYL12BO14950 172 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 TXNL1O43396 289 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 MPIG6BO95866 241 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 MT-ND4P03905 459 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 IGHV3-43DP0DP04 118 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 ADARB1P78563 741 aaKnown RBP11.2□□□□□ -0.62
SNX6-210ENST00000557341 ST3GAL4Q11206 333 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 EBI3Q14213 229 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 TMEM30BQ3MIR4 351 aa11.2□□□□□ -0.62
SNX6-210ENST00000557341 C6orf183Q5T699 404 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms