RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 TMED5Q9Y3A6 229 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 INSIG2Q9Y5U4 225 aa1.85□□□□□ -2.11
SCFD1-219ENST00000556413 ARHGAP32A7KAX9 2087 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 LYSTQ99698 3801 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 ARFGEF3Q5TH69 2177 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TRAV27A0A087WT01 109 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TRBV6-6A0A0A6YYG2 114 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 A0A0B4J2E0 115 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 IGHV2-70DA0A0C4DH43 119 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 LOC100131303A0A0U1RQF7 123 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 A0A1B0GX12 115 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PSMB11A5LHX3 300 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF726A6NNF4 738 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 C5orf58C9J3I9 102 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PLPP3O14495 311 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 RFXANKO14593 260 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 MGRN1O60291 552 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 OR10H3O60404 316 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 FCN3O75636 299 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 UBL3O95164 117 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 AK1P00568 194 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 IGHMP01871 453 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SERPINE1P05121 402 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SERPINA5P05154 406 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 DBIP07108 87 aaKnown RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 MMP7P09237 267 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 GSTT2P0CG29 244 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 GSTT2BP0CG30 244 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PGA4P0DJD7 388 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PGA3P0DJD8 388 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 UQCRBP14927 111 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PRPS1L1P21108 318 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PCMT1P22061 227 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 LAP3P28838 519 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 APLNRP35414 380 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 CRYBB2P43320 205 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 KIR2DS2P43631 304 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 EVX1P49640 407 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 GDI2P50395 445 aaKnown RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 CRISP3P54108 245 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SLC18A1P54219 525 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SH3BGRP55822 239 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 MTPNP58546 118 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PPP1CBP62140 327 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 RPS23P62266 143 aaKnown RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 VSNL1P62760 191 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 RPL18Q07020 188 aaKnown RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 IFFO1Q0D2I5 559 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 BST1Q10588 318 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PTGES3Q15185 160 aaKnown RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TAF9Q16594 264 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 DMRTC1Q5HYR2 192 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PAGE3Q5JUK9 113 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 OR2T2Q6IF00 324 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TMEM53Q6P2H8 277 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 C16orf87Q6PH81 154 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 C6orf89Q6UWU4 347 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 ZNF826PQ6ZT77 177 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 FAM220AQ7Z4H9 259 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 NANOGNBQ7Z5D8 188 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 KRTAP13-1Q8IUC0 172 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 NKAIN4Q8IVV8 208 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 LINC01561Q8N1V8 128 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SUMF2Q8NBJ7 301 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 GPR32P1Q8NGA4 272 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 OR13C2Q8NGS9 318 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 MFSD8Q8NHS3 518 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 MAGEE2Q8TD90 523 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 KLF14Q8TD94 323 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 ACMSDQ8TDX5 336 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 RAB1CQ92928 201 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SLC38A4Q969I6 547 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TMEM54Q969K7 222 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 CMBLQ96DG6 245 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 RBMXL1Q96E39 390 aaKnown RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TIMD4Q96H15 378 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 CCDC115Q96NT0 180 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 OR2V2Q96R30 315 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 MCHR1Q99705 422 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 CITED1Q99966 193 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TMEM246Q9BRR3 403 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 LINC00470Q9BZP3 86 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 OR2H1Q9GZK4 316 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 PPA2Q9H2U2 334 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TPT1P8Q9HAU6 139 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 CACYBPQ9HB71 228 aaKnown RBP1.84□□□□□ -2.11
SCFD1-219ENST00000556413 CCNB1IP1Q9NPC3 277 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 AIG1Q9NVV5 245 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TAS2R1Q9NYW7 299 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SLC25A37Q9NYZ2 338 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 GLTPQ9NZD2 209 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 SLC7A8Q9UHI5 535 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 BTNL2Q9UIR0 455 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 TMCC3Q9ULS5 477 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 UGT2A1Q9Y4X1 527 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 MAB21L2Q9Y586 359 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 N6AMT1Q9Y5N5 214 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 NPTNQ9Y639 398 aa1.84□□□□□ -2.11
SCFD1-219ENST00000556413 DSPPQ9NZW4 1301 aa1.84□□□□□ -2.12
SCFD1-219ENST00000556413 NBEAL2Q6ZNJ1 2754 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms