RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, human

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB3-210	ENST00000555810	ZNF565	Q8N9K5	539 aa		11.17	□□□□□ -0.62
TUBB3-210	ENST00000555810	TNFAIP8L1	Q8WVP5	186 aa		11.17	□□□□□ -0.62
TUBB3-210	ENST00000555810	C8orf4	Q9NR00	106 aa		11.17	□□□□□ -0.62
TUBB3-210	ENST00000555810	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	GABRP	O00591	440 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	WBP4	O75554	376 aa	Known RBP	11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	BAG2	O95816	211 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	SOX2	P48431	317 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	MED21	Q13503	144 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	RSU1	Q15404	277 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	ASCL4	Q6XD76	172 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	SATL1	Q86VE3	508 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	CNIH3	Q8TBE1	160 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	RGP1	Q92546	391 aa	Predicted RBP	11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	TMEM106A	Q96A25	262 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	BARHL1	Q9BZE3	327 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	ZNF286A	Q9HBT8	521 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	TMEM138	Q9NPI0	162 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	PCDHB16	Q9NRJ7	776 aa		11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.16	□□□□□ -0.62
TUBB3-210	ENST00000555810	FAM172BP	A6NC97	362 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	BUB1B-PAK6	H3BSN5	160 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	FGF16	O43320	207 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	SLC25A17	O43808	307 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	SPN	P16150	400 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	MYL12A	P19105	171 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	C21orf33	P30042	268 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	GDNF	P39905	211 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	MNDA	P41218	407 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	GLP1R	P43220	463 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	ETV1	P50549	477 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	GTF2A1	P52655	376 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	PPP3R1	P63098	170 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	SMN1	Q16637	294 aa	Known RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	C17orf58	Q2M2W7	97 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	NHLRC3	Q5JS37	347 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	TTC23	Q5W5X9	447 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	TEX38	Q6PEX7	206 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	BAIAP2L2	Q6UXY1	529 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	SETD9	Q8NE22	299 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	OR51A2	Q8NGJ7	313 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	OR9G1	Q8NH87	305 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	SMIM19	Q96E16	107 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	KIRREL1	Q96J84	757 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	NR1H4	Q96RI1	486 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	FAM192A	Q9GZU8	254 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	PPIL3	Q9H2H8	161 aa	Known RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	LINC00574	Q9H8X3	128 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	ING3	Q9NXR8	418 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	TAS2R4	Q9NYW5	299 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	CALY	Q9NYX4	217 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	IL36G	Q9NZH8	169 aa		11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	DIMT1	Q9UNQ2	313 aa	Known RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.15	□□□□□ -0.62
TUBB3-210	ENST00000555810	MEIKIN	A0A087WXM9	373 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	TRAV24	A0A0B4J272	114 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	LINC01548	A6NM66	108 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	OGG1	O15527	345 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	IL1A	P01583	271 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	FAM106CP	P0CH98	169 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	CGB3	P0DN86	165 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	CGB7	P0DN87	165 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	GP9	P14770	177 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	FHL3	Q13643	280 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	TPTE2P1	Q5T6R2	138 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	OR2G6	Q5TZ20	316 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	XAF1	Q6GPH4	301 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	SLC35E3	Q7Z769	313 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	LINC00596	Q86U02	117 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	THNSL2	Q86YJ6	484 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	FOXRED2	Q8IWF2	684 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	STPG2	Q8N412	459 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	PACRGL	Q8N7B6	248 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	OR10A7	Q8NGE5	316 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	OR52N1	Q8NH53	320 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	METTL9	Q9H1A3	318 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	IFT22	Q9H7X7	185 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	CHCHD3	Q9NX63	227 aa	Known RBP	11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	BABAM2	Q9NXR7	383 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	KIF25	Q9UIL4	384 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	KIAA1109	Q2LD37	5005 aa		11.14	□□□□□ -0.63
TUBB3-210	ENST00000555810	LY6L	H3BQJ8	138 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	CCRL2	O00421	344 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	HSPB6	O14558	160 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	ZNF780A	O75290	641 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	HTR3B	O95264	441 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	LY6G6C	O95867	125 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	IGHG2	P01859	326 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	CSTB	P04080	98 aa	Known RBP	11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	NFYB	P25208	207 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	BDKRB2	P30411	391 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	ZNF93	P35789	620 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	CDX1	P47902	265 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	RBM39	Q14498	530 aa	Known RBP	11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	DDI2	Q5TDH0	399 aa		11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.13	□□□□□ -0.63
TUBB3-210	ENST00000555810	SLC16A12	Q6ZSM3	486 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms