RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 SSX7Q7RTT5 188 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 KRTCAP2Q8N6L1 136 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 DYNC2LI1Q8TCX1 351 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 KCTD4Q8WVF5 259 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 TMEM56Q96MV1 263 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 ALX4Q9H161 411 aaPredicted RBP2.43□□□□□ -2.02
SYNE2-210ENST00000553455 RAB3GAP2Q9H2M9 1393 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 PEG3Q9GZU2 1588 aa2.43□□□□□ -2.02
SYNE2-210ENST00000553455 SPATA31E1Q6ZUB1 1445 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 ZNF407Q9C0G0 2248 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 TRPC5OSA6NMA1 111 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 SMLR1H3BR10 107 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 AQP9O43315 295 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 SOX14O95416 240 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 RD3LP0DJH9 198 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 CRABP2P29373 138 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 CD151P48509 253 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 CLEC6AQ6EIG7 209 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 HCP5Q6MZN7 132 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 LYZL2Q7Z4W2 148 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 FER1L6-AS1Q8NA97 138 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 SLC25A44Q96H78 314 aaPredicted RBP2.42□□□□□ -2.02
SYNE2-210ENST00000553455 BBS2Q9BXC9 721 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 FBXL3Q9UKT7 428 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 CC2D2AQ9P2K1 1620 aa2.42□□□□□ -2.02
SYNE2-210ENST00000553455 CECR2Q9BXF3 1484 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 IGLV10-54A0A075B6I4 117 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 EFCAB9A8MZ26 197 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 LTAP01374 205 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 HSPA13P48723 471 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 INPP1P49441 399 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 DYNLL1P63167 89 aaKnown RBP2.41□□□□□ -2.02
SYNE2-210ENST00000553455 FAM3AP98173 230 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 TIMM23BQ5SRD1 257 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 BOD1L2Q8IYS8 172 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 OR11G2Q8NGC1 345 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 OR11L1Q8NGX0 322 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 SLC19A3Q9BZV2 496 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 ASCL3Q9NQ33 180 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 DMAC2Q9NW81 257 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 CD300AQ9UGN4 299 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 SCML1Q9UN30 329 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 LINC00588Q9Y4M8 146 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 GMEB1Q9Y692 573 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 MAP3K19Q56UN5 1328 aa2.41□□□□□ -2.02
SYNE2-210ENST00000553455 LRPPRCP42704 1394 aaKnown RBP2.4□□□□□ -2.02
SYNE2-210ENST00000553455 TRBV24-1A0A075B6N3 115 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 SYNGR1O43759 233 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 SYNGR2O43760 224 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 SH2D1AO60880 128 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 UGT2B11O75310 529 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 ATF1P18846 271 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 PSMD7P51665 324 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 STC1P52823 247 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 RAB8AP61006 207 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 MEF2BQ02080 365 aaPredicted RBP2.4□□□□□ -2.03
SYNE2-210ENST00000553455 OR9I1Q8NGQ6 314 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 CMTM2Q8TAZ6 248 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 DTD1Q8TEA8 209 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 ARL6Q9H0F7 186 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 NAGKQ9UJ70 344 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 RPUSD1Q9UJJ7 312 aaKnown RBP2.4□□□□□ -2.03
SYNE2-210ENST00000553455 PHLDA3Q9Y5J5 127 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 PTPRKQ15262 1439 aa2.4□□□□□ -2.03
SYNE2-210ENST00000553455 BAZ1AQ9NRL2 1556 aaPredicted RBP2.4□□□□□ -2.03
SYNE2-210ENST00000553455 HMGXB3Q12766 1538 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 IGHV3OR15-7A0A075B7D8 119 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 ARGFXA6NJG6 315 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 C9J4A7 227 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 LECT2O14960 151 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 SLC31A1O15431 190 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 CBR3O75828 277 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 OPN1SWP03999 348 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 SKP2Q13309 424 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 PAFAH1B3Q15102 231 aaKnown RBP2.39□□□□□ -2.03
SYNE2-210ENST00000553455 C10orf91Q5T1B1 145 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 NIPAL1Q6NVV3 410 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 XKRXQ6PP77 449 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 TCF23Q7RTU1 214 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 MTERF4Q7Z6M4 381 aaKnown RBP2.39□□□□□ -2.03
SYNE2-210ENST00000553455 LRP11Q86VZ4 500 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 NIT1Q86X76 327 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 HS3ST5Q8IZT8 346 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 OR5P3Q8WZ94 311 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 POTEKPQ9BYX7 375 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 CHMP4BQ9H444 224 aaKnown RBP2.39□□□□□ -2.03
SYNE2-210ENST00000553455 ZNF286AQ9HBT8 521 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 C1orf109Q9NX04 203 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 COMMD9Q9P000 198 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 SLC23A2Q9UGH3 650 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 COL5A1P20908 1838 aaPredicted RBP2.39□□□□□ -2.03
SYNE2-210ENST00000553455 SMARCA2P51531 1590 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 SMARCA4P51532 1647 aa2.39□□□□□ -2.03
SYNE2-210ENST00000553455 IGKV1-12A0A0C4DH73 117 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 A0A1W2PNM2 257 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 F8VZ95 297 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 PHYHO14832 338 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 RAB36O95755 333 aa2.38□□□□□ -2.03
SYNE2-210ENST00000553455 IGKV1D-12P01611 117 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms