RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 NAA50Q9GZZ1 169 aaKnown RBP15.86■□□□□ 0.13
DDX55-207ENST00000540763 RIMS4Q9H426 269 aaPredicted RBP15.86■□□□□ 0.13
DDX55-207ENST00000540763 MBNL3Q9NUK0 354 aaKnown RBP15.86■□□□□ 0.13
DDX55-207ENST00000540763 SPATA2Q9UM82 520 aa15.86■□□□□ 0.13
DDX55-207ENST00000540763 A0A087X0M5 115 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 A0A1B0GX30 115 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 RAB27BO00194 218 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 SNRPBP14678 240 aaKnown RBP15.85■□□□□ 0.13
DDX55-207ENST00000540763 CD34P28906 385 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 TMBIM6P55061 237 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 DLX1P56177 255 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 DYNC1I2Q13409 638 aaKnown RBP15.85■□□□□ 0.13
DDX55-207ENST00000540763 TMEM30BQ3MIR4 351 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 RUSC1-AS1Q66K80 236 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 ZNF782Q6ZMW2 699 aaPredicted RBP15.85■□□□□ 0.13
DDX55-207ENST00000540763 MOB1BQ7L9L4 216 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 RTN4RL2Q86UN3 420 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 OR10R2Q8NGX6 335 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 MRGPRDQ8TDS7 321 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 RAB3CQ96E17 227 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 SLC6A7Q99884 636 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 FAAP24Q9BTP7 215 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 PECRQ9BY49 303 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 TMEM133Q9H2Q1 129 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 TRAPPC2LQ9UL33 140 aa15.85■□□□□ 0.13
DDX55-207ENST00000540763 TRBV6-6A0A0A6YYG2 114 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 ODF3BA8MYP8 253 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 TCF21O43680 179 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 NAPSAO96009 420 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 PAHP00439 452 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 PRAMEF5Q5TYX0 476 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 ZNF626Q68DY1 528 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 MRPL30Q8TCC3 161 aaKnown RBP15.84■□□□□ 0.13
DDX55-207ENST00000540763 DYRK2Q92630 601 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 ARHGAP5-AS1Q96IT6 56 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 KIRREL1Q96J84 757 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 JMJD8Q96S16 334 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 OCEL1Q9H607 264 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.84■□□□□ 0.13
DDX55-207ENST00000540763 RHBDL2Q9NX52 303 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 IDI2-AS1Q9NZ38 188 aa15.84■□□□□ 0.13
DDX55-207ENST00000540763 A0A0A6YYH2 397 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 IGHV2-26A0A0B4J1V2 119 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 A6NJ64 397 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 SERPINE3A8MV23 424 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 C15orf65H3BRN8 121 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 MFNGO00587 321 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 MMP23AO75900 390 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 SSTR5P35346 364 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 SAA4P35542 130 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 HILS1P60008 231 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 PLAC9Q5JTB6 97 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 ZNF880Q6PDB4 577 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 CLVS1Q8IUQ0 354 aaPredicted RBP15.83■□□□□ 0.12
DDX55-207ENST00000540763 PDZD9Q8IXQ8 264 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 BCL6BQ8N143 479 aaPredicted RBP15.83■□□□□ 0.12
DDX55-207ENST00000540763 PNKDQ8N490 385 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 OR52M1Q8NGK5 317 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 OR4K15Q8NH41 348 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 C22orf15Q8WYQ4 148 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 CLEC7AQ9BXN2 247 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 ATG5Q9H1Y0 275 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 DCSTAMPQ9H295 470 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 C12orf4Q9NQ89 552 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 MGAT4AQ9UM21 535 aa15.83■□□□□ 0.12
DDX55-207ENST00000540763 TBL2Q9Y4P3 447 aaKnown RBP15.83■□□□□ 0.12
DDX55-207ENST00000540763 FBP1P09467 338 aa15.82■□□□□ 0.12
DDX55-207ENST00000540763 HIST1H1DP16402 221 aaKnown RBP15.82■□□□□ 0.12
DDX55-207ENST00000540763 COX7A1P24310 79 aa15.82■□□□□ 0.12
DDX55-207ENST00000540763 MOGAT2Q3SYC2 334 aa15.82■□□□□ 0.12
DDX55-207ENST00000540763 RBMS3Q6XE24 437 aaKnown RBP15.82■□□□□ 0.12
DDX55-207ENST00000540763 SLC25A38Q96DW6 304 aa15.82■□□□□ 0.12
DDX55-207ENST00000540763 ZNF48Q96MX3 618 aaPredicted RBP15.82■□□□□ 0.12
DDX55-207ENST00000540763 KCNIP1Q9NZI2 227 aa15.82■□□□□ 0.12
DDX55-207ENST00000540763 AK3Q9UIJ7 227 aa15.82■□□□□ 0.12
DDX55-207ENST00000540763 RNF212BA8MTL3 300 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 F2RL2O00254 374 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 SPINT2O43291 252 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 NOL3O60936 208 aaKnown RBP15.81■□□□□ 0.12
DDX55-207ENST00000540763 OMGP23515 440 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 GDNFP39905 211 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 RORCP51449 518 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 PRB3Q04118 309 aaPredicted RBP15.81■□□□□ 0.12
DDX55-207ENST00000540763 DEFB112Q30KQ8 113 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 Q3ZCU0 254 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 MINOS1Q5TGZ0 78 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 LDLRAD3Q86YD5 345 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 SIGLECL1Q8N7X8 197 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 OR5H6Q8NGV6 325 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 ZNF596Q8TC21 504 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 CCDC107Q8WV48 283 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 ACOT12Q8WYK0 555 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 ARL11Q969Q4 196 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 ZMAT3Q9HA38 289 aaKnown RBP15.81■□□□□ 0.12
DDX55-207ENST00000540763 KCNK7Q9Y2U2 307 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 MINOS1-NBL1R4GNA1 71 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 CUBNO60494 3623 aa15.81■□□□□ 0.12
DDX55-207ENST00000540763 TRAV39A0A0B4J263 110 aa15.8■□□□□ 0.12
DDX55-207ENST00000540763 A0A0U1RQK1 487 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms