RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ZNF880Q6PDB4 577 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 GAPTQ8N292 157 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 SMRP1Q8NCR6 262 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 SCGB1C1Q8TD33 95 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 RAB40CQ96S21 281 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 MRPL37Q9BZE1 423 aaKnown RBP15.13■□□□□ 0.01
RAB40C-205ENST00000539661 A0A1W2PR77 199 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 SYNGR3O43761 229 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 COL10A1Q03692 680 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 RHBDD2Q6NTF9 364 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 IER2Q9BTL4 223 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 DDA1Q9BW61 102 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 TAAR3PQ9P1P4 343 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 SERF2P84101 59 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 CLN3Q13286 438 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 RSPO4Q2I0M5 234 aaPredicted RBP15.13■□□□□ 0.01
RAB40C-205ENST00000539661 WDR25Q64LD2 544 aaPredicted RBP15.13■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF385AQ96PM9 386 aaKnown RBP15.13■□□□□ 0.01
RAB40C-205ENST00000539661 ULBP2Q9BZM5 246 aa15.13■□□□□ 0.01
RAB40C-205ENST00000539661 UNC13CQ8NB66 2214 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 TUSC2O75896 110 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 HNF4GQ14541 408 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 CYP2G1PQ6ZSU1 146 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 C5orf24Q7Z6I8 188 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 CENPVQ7Z7K6 275 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF845Q96IR2 970 aaPredicted RBP15.12■□□□□ 0.01
RAB40C-205ENST00000539661 Q9N2K0 584 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 HNRNPKP61978 463 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB40C-205ENST00000539661 RABEPKQ7Z6M1 372 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 OR1F12Q8NHA8 337 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 HIST1H2AAQ96QV6 131 aa15.12■□□□□ 0.01
RAB40C-205ENST00000539661 XKRY2A2RUG3 117 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 SLC22A20A6NK97 555 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 CCDC85CA6NKD9 419 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 LCATP04180 440 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 CTXN2P0C2S0 81 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF726P1Q15940 193 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 NCR3LG1Q68D85 454 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 Q8NFD4 153 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 NAT6Q93015 286 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 SPACA9Q96E40 222 aaPredicted RBP15.11■□□□□ 0.01
RAB40C-205ENST00000539661 OR14J1Q9UGF5 321 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 OR7C1O76099 320 aaPredicted RBP15.11■□□□□ 0.01
RAB40C-205ENST00000539661 CST2P09228 141 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 FAM3BP58499 235 aaPredicted RBP15.11■□□□□ 0.01
RAB40C-205ENST00000539661 KRTAP27-1Q3LI81 207 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 LCN15Q6UWW0 184 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 GPR137CQ8N3F9 429 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 PINX1Q96BK5 328 aaKnown RBP15.11■□□□□ 0.01
RAB40C-205ENST00000539661 TMEM68Q96MH6 324 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 GAB2Q9UQC2 676 aa15.11■□□□□ 0.01
RAB40C-205ENST00000539661 CEBPZOSA8MTT3 80 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 SNRPCP09234 159 aaKnown RBP15.1■□□□□ 0.01
RAB40C-205ENST00000539661 CD27P26842 260 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 C16orf82Q7Z2V1 217 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 TMEM170AQ8WVE7 144 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 EXTL1Q92935 676 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 PARD6GQ9BYG4 376 aaPredicted RBP15.1■□□□□ 0.01
RAB40C-205ENST00000539661 WASF3Q9UPY6 502 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 A0A1B0GWJ7 208 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 PPP5D1E7EU14 171 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 CYTIPO60759 359 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 DKK1O94907 266 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 IL18BPO95998 194 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 CCKARP32238 428 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 MDH2P40926 338 aaKnown RBP15.1■□□□□ 0.01
RAB40C-205ENST00000539661 CLDN15P56746 228 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 TMEM241Q24JQ0 296 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 ADGRG7Q96K78 797 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 RSG1Q9BU20 258 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 PRSS50Q9UI38 385 aa15.1■□□□□ 0.01
RAB40C-205ENST00000539661 CCDC163A0A0D9SF12 145 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 KIR2DS1A0A191URI9 304 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 hCG_38984A0A1B0GV85 526 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 CNOT4O95628 575 aaKnown RBP15.09■□□□□ 0.01
RAB40C-205ENST00000539661 NAPSAO96009 420 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 HLA-HP01893 362 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 S100GP29377 79 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 KIR2DS4P43632 304 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 KIR2DS1Q14954 304 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 DAZAP2Q15038 168 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-205ENST00000539661 TMEM41BQ5BJD5 291 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF295-AS1Q8N0V1 137 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 OR51G1Q8NGK1 321 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 TMEM18Q96B42 140 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 OR5B12Q96R08 314 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 PPP1R14DQ9NXH3 145 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 OR6C6A6NF89 314 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 ZNF705GA8MUZ8 300 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-205ENST00000539661 KIAA1324LA8MWY0 1029 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-205ENST00000539661 MYF5P13349 255 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 MDKP21741 143 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-205ENST00000539661 RPS18P62269 152 aaKnown RBP15.09■□□□□ 0.01
RAB40C-205ENST00000539661 PDCD1Q15116 288 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 NKAIN1Q4KMZ8 207 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 PLCXD3Q63HM9 321 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 SMIM7Q9BQ49 75 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 LAMP3Q9UQV4 416 aa15.09■□□□□ 0.01
RAB40C-205ENST00000539661 ADAMTS20P59510 1910 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 IGKV1D-13A0A0B4J2D9 117 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms