RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CA10Q9NS85 328 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 ANXA10Q9UJ72 324 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 TRAV38-1A0A0B4J264 116 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 DNLZQ5SXM8 178 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 TUSC5Q8IXB3 177 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 GABRG3Q99928 467 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 SLC25A17O43808 307 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 CTLA4P16410 223 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 SRP14P37108 136 aaKnown RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 KIAA0040Q15053 153 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF506Q5JVG8 444 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 TMEM211Q6ICI0 200 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 CADM4Q8NFZ8 388 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 OR6X1Q8NH79 312 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 MYOZ3Q8TDC0 251 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 IGLV3-16A0A075B6K0 115 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 IGHV3-13P01766 116 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 IGHV3-7P01780 117 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 GALNSP34059 522 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 CDX1P47902 265 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 AMER3Q8N944 861 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 IGHV5-51A0A0C4DH38 117 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 DMKNQ6E0U4 476 aaPredicted RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 FLYWCH2Q96CP2 140 aaKnown RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 PLSCR4Q9NRQ2 329 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 MRM2Q9UI43 246 aaKnown RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 FAM157AC9JC47 383 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 CTSVO60911 334 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 NDUFS6O75380 124 aaKnown RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 SRSF10O75494 262 aaKnown RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 APCSP02743 223 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 MGPP08493 103 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 SMAGPQ0VAQ4 97 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 IZUMO4Q1ZYL8 232 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 MPV17LQ2QL34 196 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 THSD4Q6ZMP0 1018 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 RAB1CQ92928 201 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 HSPB9Q9BQS6 159 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 MEGF9Q9H1U4 602 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 PARP11Q9NR21 331 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 PRR13Q9NZ81 148 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 GLI3P10071 1580 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 PRSS47A8MTI9 375 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 CXCL10P02778 98 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 PGA4P0DJD7 388 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 PGA5P0DJD9 388 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 RPS4XP62701 263 aaKnown RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 IFITM2Q01629 132 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 KHDC3LQ587J8 217 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 PUSL1Q8N0Z8 303 aaKnown RBP8.76□□□□□ -1.01
COL4A6-208ENST00000538570 C10orf35Q96D05 121 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 WDR34Q96EX3 536 aa8.76□□□□□ -1.01
COL4A6-208ENST00000538570 BRS3P32247 399 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 SLC35E3Q7Z769 313 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 TEX29Q8N6K0 151 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 ZNF784Q8NCA9 323 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-208ENST00000538570 OR1P1Q8NH06 330 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 MRGPRX3Q96LB0 322 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 OGG1O15527 345 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 HYAL3O43820 417 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-208ENST00000538570 TSPO2Q5TGU0 170 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 MRPL54Q6P161 138 aaKnown RBP8.75□□□□□ -1.01
COL4A6-208ENST00000538570 TNFRSF14Q92956 283 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 SLC52A3Q9NQ40 469 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 PLA2G10O15496 165 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 TRGC2P03986 189 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 MDKP21741 143 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-208ENST00000538570 GCSHP23434 173 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 C10orf113Q5VZT2 155 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 PRSS41Q7RTY9 318 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 SELENOHQ8IZQ5 122 aaKnown RBP8.75□□□□□ -1.01
COL4A6-208ENST00000538570 RASL11BQ9BPW5 248 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 A0A1B0GUL6 1792 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 PEX11BO96011 259 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 FAM157CP0CG43 387 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 IER3P46695 156 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 NMUP48645 174 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 P2RY4P51582 365 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 METAP1P53582 386 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 OR8A1Q8NGG7 326 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 OR8B3Q8NGG8 313 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 OR8B2Q96RD0 313 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 PATE4P0C8F1 98 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 FAM219BQ5XKK7 198 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 Q6ZS52 159 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 BHLHA15Q7RTS1 189 aaPredicted RBP8.75□□□□□ -1.01
COL4A6-208ENST00000538570 SLC25A42Q86VD7 318 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 Q8WTZ3 238 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 MIXL1Q9H2W2 232 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 NEU3Q9UQ49 428 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 NRAPQ86VF7 1730 aa8.75□□□□□ -1.01
COL4A6-208ENST00000538570 SNURFLB1AK76 121 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 TMPRSS2O15393 492 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 MT-CO3P00414 261 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 PMELP40967 661 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 OR8I2Q8N0Y5 310 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 GAPTQ8N292 157 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 LINC01555Q8NAE3 123 aa8.74□□□□□ -1.01
COL4A6-208ENST00000538570 SSMEM1Q8WWF3 244 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms