RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SRSF2Q01130 221 aaKnown RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 MXD1Q05195 221 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 UNC119Q13432 240 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 SLC9A3R2Q15599 337 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 AANATQ16613 207 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 C2orf76Q3KRA6 126 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 DHRS7BQ6IAN0 325 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR10K2Q6IF99 312 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 CCDC144NLQ6NUI1 221 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 C16orf87Q6PH81 154 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 BRICD5Q6PL45 260 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 C12orf54Q6X4T0 127 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 LIAT1Q6ZQX7 453 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 SLC16A12Q6ZSM3 486 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 C6orf201Q7Z4U5 140 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZNF554Q86TJ5 538 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 LYPD6Q86Y78 171 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 CROCCP3Q8IVE0 287 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 PRR18Q8N4B5 295 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZDHHC22Q8N966 263 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 DTX3Q8N9I9 347 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 BEND2Q8NDZ0 799 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR13A1Q8NGR1 328 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR10X1Q8NGY0 326 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR4K15Q8NH41 348 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR9G1Q8NH87 305 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 SETD6Q8TBK2 473 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 DYRK2Q92630 601 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 RPEQ96AT9 228 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 RAB3CQ96E17 227 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 MALSU1Q96EH3 234 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 KIRREL1Q96J84 757 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 LPAR5Q9H1C0 372 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ATG5Q9H1Y0 275 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR51E2Q9H255 320 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 RIMS4Q9H426 269 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 KCNK15Q9H427 330 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 PRDM13Q9H4Q3 707 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 LIN7BQ9HAP6 207 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ESM1Q9NQ30 184 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 C12orf4Q9NQ89 552 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 ZNRD1Q9P1U0 126 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 GNG12Q9UBI6 72 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 FBLN5Q9UBX5 448 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 DAPK2Q9UIK4 370 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 PITPNC1Q9UKF7 332 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 VPREB3Q9UKI3 123 aa4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 YLPM1P49750 1951 aaKnown RBP4.4□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A087X0M5 115 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 TMEM272A0A1B0GTI8 110 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 A0A1B0GX30 115 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SMIM30A4D0T7 59 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 FAM172BPA6NC97 362 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 POM121CA8CG34 1229 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 OOSP1A8MZH6 123 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 H3BUX3 64 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 GPR137BO60478 399 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 IGHV4-59P01825 116 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 HBZP02008 142 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 CD3GP09693 182 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 CD37P11049 281 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 JUNBP17275 347 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SDC2P34741 201 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 TALDO1P37837 337 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 IER3P46695 156 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 VEGFCP49767 419 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 GNG10P50151 68 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SCAND1P57086 179 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 QRFPP83859 136 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 FOXL1Q12952 345 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 MADCAM1Q13477 382 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 ARFRP1Q13795 201 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SSX2Q16385 188 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 C17orf58Q2M2W7 97 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 TUSC1Q2TAM9 212 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 HLA-DRB5Q30154 266 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 PLA1AQ53H76 456 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 IDNKQ5T6J7 187 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 HCP5Q6MZN7 132 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SFXN4Q6P4A7 337 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 Q6ZTK2 550 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 GPR141Q7Z602 305 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 C11orf42Q8N5U0 333 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 C3orf56Q8N813 242 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR52M1Q8NGK5 317 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR4C13Q8NGP0 309 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 OR4F5Q8NH21 305 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SPATA3Q8NHX4 192 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 RFESDQ8TAC1 157 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 TOMM40LQ969M1 308 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 PTX4Q96A99 478 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 GALMQ96C23 342 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 AKR1E2Q96JD6 320 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 GFI1Q99684 422 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 MDFIQ99750 246 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 SSX3Q99909 188 aa4.39□□□□□ -1.71
HMGB1P40-201ENST00000525121 CMSS1Q9BQ75 279 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms