RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 C15orf65H3BRN8 121 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 F2RL2O00254 374 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 TOR1AO14656 332 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A15PP0C7V4 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A13PP0C7W8 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A14PP0C7W9 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A24PP0C7X0 464 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 HSMCR30P0CW71 290 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 CPEP16870 476 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 GZMHP20718 246 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 VHLP40337 213 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 PRRX1P54821 245 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 RPS25P62851 125 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 HSD17B12Q53GQ0 312 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 TPTE2P1Q5T6R2 138 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 GAPTQ8N292 157 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 Q8N2B8 174 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 LEAP2Q969E1 77 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 CREB3L1Q96BA8 519 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 SELENOIQ9C0D9 397 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 PSG11Q9UQ72 335 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 MCRIP1C9JLW8 97 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 J3QR06 171 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 IGHV3-7P01780 117 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 TBCEQ15813 527 aaPredicted RBP9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 LTC4SQ16873 150 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 FBLN7Q53RD9 439 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 GLT8D1Q68CQ7 371 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 RAB12Q6IQ22 244 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 OR2T6Q8NHC8 308 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 NEK7Q8TDX7 302 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 CCDC107Q8WV48 283 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 MGLLQ99685 303 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 PEX16Q9Y5Y5 336 aa9.32□□□□□ -0.92
SH3RF1-205ENST00000511421 OOSP1A8MZH6 123 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 ORC5O43913 435 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 GLAP06280 429 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 UBBP0CG47 229 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 VSIG8P0DPA2 414 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 FUT3P21217 361 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 CD24P25063 80 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 CEACAM3P40198 252 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 RBM39Q14498 530 aaKnown RBP9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 HABP2Q14520 560 aaPredicted RBP9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 TRAM1Q15629 374 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 OR10K2Q6IF99 312 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 C11orf88Q6PI97 169 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 TREML4Q6UXN2 200 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 Q6ZS46 218 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 SLC16A12Q6ZSM3 486 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 ARL11Q969Q4 196 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM46BQ96A09 425 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 GFI1Q99684 422 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 SERTAD4Q9NUC0 356 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 ETAA1Q9NY74 926 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 BLOC1S6Q9UL45 172 aa9.31□□□□□ -0.92
SH3RF1-205ENST00000511421 AIPO00170 330 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 TIMM23O14925 209 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 SLC22A1O15245 554 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 MPIG6BO95866 241 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 PSMA1P25786 263 aaKnown RBP9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 BRS3P32247 399 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 LOXL3P58215 753 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 BLCAPP62952 87 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 QRFPP83859 136 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 FABP5Q01469 135 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 SYT6Q5T7P8 510 aaPredicted RBP9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM53AQ6NSI3 398 aaPredicted RBP9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 DTX3Q8N9I9 347 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 OR52M1Q8NGK5 317 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 UBALD1Q8TB05 177 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 CST11Q9H112 138 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 KCNK15Q9H427 330 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 ACOT13Q9NPJ3 140 aa9.3□□□□□ -0.92
SH3RF1-205ENST00000511421 FAM90A9PA6NNJ1 464 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 TMEM14DPA8MWL7 114 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 C12orf77C9JDV5 145 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 PDCD6O75340 191 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 CA11O75493 328 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 HTR2CP28335 458 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 GNG10P50151 68 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 RPS27AP62979 156 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 UNC119Q13432 240 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 DIAPH2-AS1Q14236 149 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 HERPUD1Q15011 391 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 SSX1Q16384 188 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 CCDC144NLQ6NUI1 221 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 ZNF367Q7RTV3 350 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 KLHDC1Q8N7A1 406 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 OR4K15Q8NH41 348 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 RPEQ96AT9 228 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 TM2D1Q9BX74 207 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 GFOD1Q9NXC2 390 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 VWFP04275 2813 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 A0A1W2PPE3 182 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 UBE2QL1A1L167 161 aa9.29□□□□□ -0.92
SH3RF1-205ENST00000511421 H3BUI4 141 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms