RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PGCP20142 388 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 AZU1P20160 251 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 IGHV1-2P23083 117 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 DCKP27707 260 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 RBM34P42696 430 aaKnown RBP4.04□□□□□ -1.76
NIPBL-205ENST00000505998 DNASE1L1P49184 302 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 CTBP2P56545 445 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 CLDN18P56856 261 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 RGS8P57771 180 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-205ENST00000505998 OR2B6P58173 313 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 PRPS1P60891 318 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 H3F3AP84243 136 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 MERTKQ12866 999 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 GUSBP1Q15486 140 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 ZBED5Q49AG3 693 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 PRAMEF20Q5VT98 475 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 GPR107Q5VW38 600 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 ZNF57Q68EA5 555 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-205ENST00000505998 FAHD2BQ6P2I3 314 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-205ENST00000505998 ENPP6Q6UWR7 440 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 BHLHA15Q7RTS1 189 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-205ENST00000505998 GALNT10Q86SR1 603 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 MARCH3Q86UD3 253 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 DHFR2Q86XF0 187 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 ZNF786Q8N393 782 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 ZNF561Q8N587 486 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 OR1M1Q8NGA1 313 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 OR5M1Q8NGP8 315 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 OR1J4Q8NGS1 313 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 OR13C2Q8NGS9 318 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 OR10J5Q8NHC4 309 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 CD300LFQ8TDQ1 290 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 C22orf15Q8WYQ4 148 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 MCUR1Q96AQ8 359 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 C12orf43Q96C57 262 aaKnown RBP4.04□□□□□ -1.76
NIPBL-205ENST00000505998 FAHD2AQ96GK7 314 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 SLC41A3Q96GZ6 507 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 PYURFQ96I23 114 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 PFDN5Q99471 154 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 KIR2DL4Q99706 377 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 MED18Q9BUE0 208 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 PDCD10Q9BUL8 212 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 TM2D1Q9BX74 207 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 PARD6GQ9BYG4 376 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-205ENST00000505998 POTEKPQ9BYX7 375 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 METTL7AQ9H8H3 244 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 CALHM2Q9HA72 323 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 AGPAT4Q9NRZ5 378 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 KLHL28Q9NXS3 571 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 TREM2Q9NZC2 230 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 CLEC2DQ9UHP7 191 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 BAIAP2Q9UQB8 552 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 NUBP2Q9Y5Y2 271 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 LRRK2Q5S007 2527 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 ALPK2Q86TB3 2170 aa4.04□□□□□ -1.76
NIPBL-205ENST00000505998 RELNP78509 3460 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 SPTBN1Q01082 2364 aaKnown RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 LOC102725191A0A1B0GVB3 256 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 A0A1B0GWA3 101 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 DHRS12A0PJE2 317 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 C9orf170A2RU37 121 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 TRAPPC13A5PLN9 417 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 J3QRK9 145 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 M0QZK8 103 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 RGS5O15539 181 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 PRKYO43930 277 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 SLC22A5O76082 557 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 OPN1SWP03999 348 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 IFNW1P05000 195 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 IFNA6P05013 189 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 IGF1P05019 195 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 H2BFMP0C1H6 154 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 PNMTP11086 282 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 SLC2A1P11166 492 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 NR2C1P13056 603 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 IL7P13232 177 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 NCK1P16333 377 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 CD36P16671 472 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 PAX6P26367 422 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 CD1BP29016 333 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 AQP1P29972 269 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 ERP29P30040 261 aaKnown RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 CDKN1BP46527 198 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 LHX2P50458 406 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 PPT1P50897 306 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 RPL8P62917 257 aaKnown RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 OC90Q02509 493 aaPredicted RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 TSPAN31Q12999 210 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 QPRTQ15274 297 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 ZNF79Q15937 498 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 C9orf129Q5T035 196 aaKnown RBP4.03□□□□□ -1.76
NIPBL-205ENST00000505998 HACD4Q5VWC8 232 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 PVRIGQ6DKI7 326 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 ULK3Q6PHR2 472 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 CLEC18BQ6UXF7 455 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 GDPD3Q7L5L3 318 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 VTCN1Q7Z7D3 282 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 SVOPLQ8N434 492 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 SYT14Q8NB59 555 aa4.03□□□□□ -1.76
NIPBL-205ENST00000505998 C19orf18Q8NEA5 215 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms