RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 A0A0J9YW62 118 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 C1QCP02747 245 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 USF1P22415 310 aaPredicted RBP14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 PMS2P11Q13670 270 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 FAM74A3Q4VXF1 159 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 VPS25Q9BRG1 176 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 NUDT16L1Q9BRJ7 211 aaKnown RBP14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 ELOA3CA0A087WX78 387 aaPredicted RBP14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 TMEM50BP56557 158 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 NHLH1Q02575 133 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 NHLH2Q02577 135 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 ANKRD55Q3KP44 614 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 FLYWCH2Q96CP2 140 aaKnown RBP14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 PGLYRP3Q96LB9 341 aa14.43□□□□□ -0.1
PCDHA1-203ENST00000504120 LINC00862A6NCI5 91 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 RPL13AP40429 203 aaKnown RBP14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 PSG5Q15238 335 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 TRPM6Q9BX84 2022 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 NEURL1O76050 574 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 IGF2P01344 180 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 ERVS71-1P61550 626 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 SLC35E3Q7Z769 313 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 MRGPRGQ86SM5 289 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 FAM157AC9JC47 383 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 AP4M1O00189 453 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 ACP1P24666 158 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 Q1RN00 199 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 TMEM65Q6PI78 240 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 OR4P4Q8NGL7 312 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 OR1L1Q8NH94 360 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 SYNGR1O43759 233 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 GNG7O60262 68 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 UPK3AO75631 287 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 OR10A7Q8NGE5 316 aa14.42□□□□□ -0.1
PCDHA1-203ENST00000504120 C16orf97H3BN30 126 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 PDE6DO43924 150 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 OR5AL1P0C617 328 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 VAX1Q5SQQ9 334 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 ANGPTL4Q9BY76 406 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 LTBP1Q14766 1721 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 F5H697 171 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 DNASE2O00115 360 aaPredicted RBP14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 ZNF205O95201 554 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 G6PCP35575 357 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 SLC2A8Q9NY64 477 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 TNFSF18Q9UNG2 199 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 TRBV5-5A0A0J9YX44 114 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 CAMPP49913 170 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 SIRT7Q9NRC8 400 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 NPTNQ9Y639 398 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 BRWD1Q9NSI6 2320 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 ASCC3Q8N3C0 2202 aaKnown RBP14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 ROM1Q03395 351 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 FUT5Q11128 374 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 DPPA3Q6W0C5 159 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 HARBI1Q96MB7 349 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 COA4Q9NYJ1 87 aa14.41□□□□□ -0.1
PCDHA1-203ENST00000504120 RP1L1Q8IWN7 2480 aaPredicted RBP14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 F2RL2O00254 374 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 FCGR3AP08637 254 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 PSG2P11465 335 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 GTF2H5Q6ZYL4 71 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 SSMEM1Q8WWF3 244 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 TREM2Q9NZC2 230 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 INSIG2Q9Y5U4 225 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 IGHV1-45A0A0A0MS14 117 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 GAMTQ14353 236 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 CEACAM21Q3KPI0 293 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 ZNF788Q6ZQV5 615 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 STXBP6Q8NFX7 210 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 DYRK2Q92630 601 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 RASL11BQ9BPW5 248 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 ABHD14AQ9BUJ0 271 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 PTPRZ1P23471 2315 aaPredicted RBP14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 ZNF716A6NP11 495 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 MFNGO00587 321 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 PSG4Q00888 419 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 OR2J1Q9GZK6 312 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 OR2T8A6NH00 312 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 SPRED2Q7Z698 418 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 RFLNBQ8N5W9 214 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 FBLIM1Q8WUP2 373 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 PERPQ96FX8 193 aa14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 RCC2Q9P258 522 aaKnown RBP14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 NUP214P35658 2090 aaPredicted RBP14.4□□□□□ -0.1
PCDHA1-203ENST00000504120 GCM2O75603 506 aaPredicted RBP14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 ARG1P05089 322 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 CRISP2P16562 243 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 DLK1P80370 383 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 AESQ08117 197 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 TMEM97Q5BJF2 176 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 MSL2Q9HCI7 577 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 SPAARA0A1B0GVQ0 90 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 NPY1RP25929 384 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 OR1L8Q8NGR8 309 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 ZNF519Q8TB69 540 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 HDHD3Q9BSH5 251 aaPredicted RBP14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 CTXND1A0A1B0GTU2 59 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 A0A1W2PRD5 423 aa14.39□□□□□ -0.11
PCDHA1-203ENST00000504120 A0A1W2PRF3 423 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms