RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 YIF1BQ5BJH7 314 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 SLC35D3Q5M8T2 416 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 BCL2L15Q5TBC7 163 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 PRAMEF5Q5TYX0 476 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 C1orf146Q5VVC0 180 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 DEGS2Q6QHC5 323 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 TCF23Q7RTU1 214 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 OVCH2Q7RTZ1 564 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 ZNF329Q86UD4 541 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 TPRA1Q86W33 373 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 SLC35F2Q8IXU6 374 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 ZNF679Q8IYX0 411 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 ELMOD2Q8IZ81 293 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 OR11H6Q8NGC7 330 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 OR4X2Q8NGF9 303 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 GRPEL2Q8TAA5 225 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 EMG1Q92979 244 aaKnown RBP4.37□□□□□ -1.71
SPTA1-209ENST00000498708 CCDC124Q96CT7 223 aaKnown RBP4.37□□□□□ -1.71
SPTA1-209ENST00000498708 LRGUKQ96M69 825 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 DUX3Q96PT4 197 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 NRIP2Q9BQI9 281 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 SLC25A33Q9BSK2 321 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 CLEC7AQ9BXN2 247 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 TMEM133Q9H2Q1 129 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 MAGIXQ9H6Y5 334 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 ZNF556Q9HAH1 456 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 PLGRKTQ9HBL7 147 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 MTCH1Q9NZJ7 389 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 OR52A1Q9UKL2 312 aa4.37□□□□□ -1.71
SPTA1-209ENST00000498708 TSSC4Q9Y5U2 329 aaPredicted RBP4.37□□□□□ -1.71
SPTA1-209ENST00000498708 IGKV1-27A0A075B6S5 117 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 A0A1B0GTI1 187 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 hADV38S2A0JD32 116 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 CCDC182A6NF36 153 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 H0Y8G0 127 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 H3BUI4 141 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 DLGAP1O14490 977 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 ZNF737O75373 536 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 APOL3O95236 402 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 CLIC3O95833 236 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 FAM107AO95990 144 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 HAND1O96004 215 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 IGLV3-1P01715 115 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 IGHV3-7P01780 117 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 RAP2AP10114 183 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 BCL3P20749 454 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 HTR1DP28221 377 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 PEX2P28328 305 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 OR3A4PP47883 348 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 NPBWR2P48146 333 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 HOXA1P49639 335 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 EIF2B2P49770 351 aaKnown RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 GBX2P52951 348 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 NANOS3P60323 173 aaKnown RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 SPCS3P61009 180 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 GNGT1P63211 74 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 ROM1Q03395 351 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 SCN1BQ07699 218 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 HNF4GQ14541 408 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 LTC4SQ16873 150 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 LRRC36Q1X8D7 754 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 LCN1P1Q5VSP4 162 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 ZNF322Q6U7Q0 402 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 SLC25A26Q70HW3 274 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 ABHD12Q8N2K0 398 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 YIPF7Q8N8F6 280 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 OR4P4Q8NGL7 312 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 OR52N1Q8NH53 320 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 RFT1Q96AA3 541 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 ISOC1Q96CN7 298 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 BORCS8Q96FH0 119 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 SNX22Q96L94 193 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 NOL4LQ96MY1 436 aaPredicted RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 NEURL2Q9BR09 285 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 PLEKHA1Q9HB21 404 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 HES4Q9HCC6 221 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 RBFOX1Q9NWB1 397 aaKnown RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 NDE1Q9NXR1 346 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 NUFIP1Q9UHK0 495 aaKnown RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 DIMT1Q9UNQ2 313 aaKnown RBP4.36□□□□□ -1.71
SPTA1-209ENST00000498708 SLC7A11Q9UPY5 501 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 GMPPBQ9Y5P6 360 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 R4GMQ9 66 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 V9GYS6 101 aa4.36□□□□□ -1.71
SPTA1-209ENST00000498708 PSMB11A5LHX3 300 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 ARRDC5A6NEK1 342 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 FAM90A22PA8MWA6 464 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 ZNF670-ZNF695F2Z2N8 137 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 TOR1AO14656 332 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 SYT7O43581 403 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 PRKYO43930 277 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 RAMP3O60896 148 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 SRSF10O75494 262 aaKnown RBP4.35□□□□□ -1.71
SPTA1-209ENST00000498708 CDK2P24941 298 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 MPZP25189 248 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 NFYBP25208 207 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 AZGP1P25311 298 aaKnown RBP4.35□□□□□ -1.71
SPTA1-209ENST00000498708 BRS3P32247 399 aa4.35□□□□□ -1.71
SPTA1-209ENST00000498708 GLIPR1P48060 266 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms