RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 KCNK7Q9Y2U2 307 aa11.83□□□□□ -0.52
USP11-212ENST00000497179 SESN1Q9Y6P5 492 aa11.83□□□□□ -0.52
USP11-212ENST00000497179 SETD2Q9BYW2 2564 aaPredicted RBP11.82□□□□□ -0.52
USP11-212ENST00000497179 TRBV6-6A0A0A6YYG2 114 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 CENPVL3A0A0U1RRI6 287 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 POM121CA8CG34 1229 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 SERPINE3A8MV23 424 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 NPIPB11E5RHQ5 1161 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 RNASEK-C17orf49H0YIS7 233 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 ORC5O43913 435 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 GNB3P16520 340 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 SRD5A1P18405 259 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 GZMHP20718 246 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 SSTR5P35346 364 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 DLX1P56177 255 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 KLRD1Q13241 179 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 C6orf183Q5T699 404 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 PRAMEF5Q5TYX0 476 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 GPR157Q5UAW9 335 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 HCP5Q6MZN7 132 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 MZT2AQ6P582 158 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 ZNF880Q6PDB4 577 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 TRAT1Q6PIZ9 186 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 ZNF782Q6ZMW2 699 aaPredicted RBP11.82□□□□□ -0.52
USP11-212ENST00000497179 Q6ZPA2 131 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 MOB1BQ7L9L4 216 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 ZNF554Q86TJ5 538 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 C12orf4Q9NQ89 552 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 COMMD3Q9UBI1 195 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 NUP50Q9UKX7 468 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
USP11-212ENST00000497179 A0A075B6Q4 140 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 IGHV1-69DA0A0B4J2H0 117 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 DPPA5A6NC42 116 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 C12orf77C9JDV5 145 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 C15orf65H3BRN8 121 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 MMP23AO75900 390 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 IGHV1-69P01742 117 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 APOA1P02647 267 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 GSTP1P09211 210 aaKnown RBP11.81□□□□□ -0.52
USP11-212ENST00000497179 FAM157CP0CG43 387 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 RCC1P18754 421 aaPredicted RBP11.81□□□□□ -0.52
USP11-212ENST00000497179 CDK2P24941 298 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 GDNFP39905 211 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 BPIFB3P59826 476 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 GUCA2AQ02747 115 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 C9orf139Q6ZV77 190 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 PHF21AQ96BD5 680 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 CMSS1Q9BQ75 279 aaKnown RBP11.81□□□□□ -0.52
USP11-212ENST00000497179 HDHD3Q9BSH5 251 aaPredicted RBP11.81□□□□□ -0.52
USP11-212ENST00000497179 HEXA-AS1Q9H8Q6 139 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 CHMP1AQ9HD42 196 aaPredicted RBP11.81□□□□□ -0.52
USP11-212ENST00000497179 DIABLOQ9NR28 239 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 IDI2-AS1Q9NZ38 188 aa11.81□□□□□ -0.52
USP11-212ENST00000497179 IGHV3OR16-10A0A075B7F0 116 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 EIF4EP06730 217 aaKnown RBP11.8□□□□□ -0.52
USP11-212ENST00000497179 CD3GP09693 182 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 EPHA1P21709 976 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 OMGP23515 440 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 UBE2E1P51965 193 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 PRB3Q04118 309 aaPredicted RBP11.8□□□□□ -0.52
USP11-212ENST00000497179 SCGB2A2Q13296 93 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 ZNF260Q3ZCT1 412 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 CDNFQ49AH0 187 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 OR52W1Q6IF63 320 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 OR10A7Q8NGE5 316 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 ARL11Q969Q4 196 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 S100A16Q96FQ6 103 aaKnown RBP11.8□□□□□ -0.52
USP11-212ENST00000497179 KIRREL1Q96J84 757 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 SLIRPQ9GZT3 109 aaKnown RBP11.8□□□□□ -0.52
USP11-212ENST00000497179 TMEM133Q9H2Q1 129 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 ZMAT3Q9HA38 289 aaKnown RBP11.8□□□□□ -0.52
USP11-212ENST00000497179 RAB9BQ9NP90 201 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 ZNF69Q9UC07 566 aa11.8□□□□□ -0.52
USP11-212ENST00000497179 NAV3Q8IVL0 2385 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 TRAV18A0A075B6X5 111 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 A0A087X0M5 115 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 A0A1B0GX30 115 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 TMEM235A6NFC5 223 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 F2RL2O00254 374 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 XRCC3O43542 346 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 HPGDSO60760 199 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 COX7A1P24310 79 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 CD34P28906 385 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 MRPS15P82914 257 aaKnown RBP11.79□□□□□ -0.52
USP11-212ENST00000497179 ARFRP1Q13795 201 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 HMGN3Q15651 99 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 PNLIPRP3Q17RR3 467 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 TMEM30BQ3MIR4 351 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 HACD4Q5VWC8 232 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 FOXB2Q5VYV0 432 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 RUSC1-AS1Q66K80 236 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 BRD3OSQ6XYD6 125 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 PDZD9Q8IXQ8 264 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 PNKDQ8N490 385 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 OR11H6Q8NGC7 330 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 OR13D1Q8NGV5 346 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 DGCR14Q96DF8 476 aaKnown RBP11.79□□□□□ -0.52
USP11-212ENST00000497179 SUCNR1Q9BXA5 334 aa11.79□□□□□ -0.52
USP11-212ENST00000497179 NXF2Q9GZY0 626 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms