RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 C1orf174Q8IYL3 243 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 CHST4Q8NCG5 386 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 GPR26Q8NDV2 337 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 PROKR2Q8NFJ6 384 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 OPALINQ96PE5 141 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF317Q96PQ6 595 aaPredicted RBP3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 IFI27L2Q9H2X8 130 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 RNF122Q9H9V4 155 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 PEF1Q9UBV8 284 aaKnown RBP3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 C15orf41Q9Y2V0 281 aa3.14□□□□□ -1.91
SSX2IP-208ENST00000490476 TRAV40A0A0B4J280 105 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 SERPINE3A8MV23 424 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 H0YGG7 62 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 H7C1H1 209 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 GCM2O75603 506 aaPredicted RBP3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 MYO1DO94832 1006 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 HLA-DPB1P04440 258 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 PAEPP09466 180 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 TCP1P17987 556 aaKnown RBP3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 SRMP19623 302 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 CSNK1A1P48729 337 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 PSMD4P55036 377 aaKnown RBP3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 YWHAEP62258 255 aaKnown RBP3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 LCN2P80188 198 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 ERCC8Q13216 396 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 MADCAM1Q13477 382 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 FAM53BQ14153 422 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 TMEM255AQ5JRV8 349 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 BHLHA15Q7RTS1 189 aaPredicted RBP3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 ABHD12BQ7Z5M8 362 aaPredicted RBP3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 VTCN1Q7Z7D3 282 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 OR10AD1Q8NGE0 317 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 OR5AR1Q8NGP9 310 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 TM4SF18Q96CE8 201 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 LYSMD1Q96S90 227 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 HBEGFQ99075 208 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 SPNS1Q9H2V7 528 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 NOX3Q9HBY0 568 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 ISYNA1Q9NPH2 558 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 CLN6Q9NWW5 311 aa3.13□□□□□ -1.91
SSX2IP-208ENST00000490476 IGHV3-74A0A0B4J1X5 117 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 SYCE1LA8MT33 242 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 GABRPO00591 440 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 NME4O00746 187 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 HSBP1O75506 76 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 NSA2O95478 260 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 MBP02144 154 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 CD28P10747 220 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 ERGP11308 486 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF708P17019 499 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 MSR1P21757 451 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 HSPA9P38646 679 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 GCLMP48507 274 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 CTBP2P56545 445 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 CLDN18P56856 261 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 PPP1CBP62140 327 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 SNRPFP62306 86 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 CDH17Q12864 832 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 DGCR6Q14129 220 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 QPRTQ15274 297 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 NPSR1Q6W5P4 371 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 FBXW12Q6X9E4 464 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 FAM183BPQ6ZVS7 135 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 FAM122BQ7Z309 247 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 SH2D6Q7Z4S9 175 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 CBLN2Q8IUK8 224 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 C12orf56Q8IXR9 622 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 VKORC1L1Q8N0U8 176 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 UMODL1-AS1Q8N2C9 162 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 RIBC1Q8N443 379 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 RNF10Q8N5U6 811 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 Q8N976 141 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 OR5T3Q8NGG3 340 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 OR10G4Q8NGN3 311 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 FNDC9Q8TBE3 224 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 TFGQ92734 400 aaPredicted RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 MUCL1Q96DR8 90 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 UQCC2Q9BRT2 126 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 NAA50Q9GZZ1 169 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 OR52A5Q9H2C5 316 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 LRRC19Q9H756 370 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 MCUBQ9NWR8 336 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 MTFP1Q9UDX5 166 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 SIGLEC9Q9Y336 463 aa3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 CHTOPQ9Y3Y2 248 aaKnown RBP3.12□□□□□ -1.91
SSX2IP-208ENST00000490476 A0A096LNJ9 63 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 A0A0U1RQV1 116 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 NUPR2A6NF83 97 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 RTL8CO15255 209 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 AQP8O94778 261 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 FARS2O95363 451 aaKnown RBP3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 BCHEP06276 602 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 CD3GP09693 182 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 PRKACAP17612 351 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 IL1RNP18510 177 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 PMCHP20382 165 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 CNTFRP26992 372 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 CD151P48509 253 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 HCAR3P49019 387 aa3.11□□□□□ -1.91
SSX2IP-208ENST00000490476 ZNF83P51522 516 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms