RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 OR5B3Q8NH48 314 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 ASB10Q8WXI3 467 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 C11orf40Q8WZ69 217 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 TNFRSF14Q92956 283 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 LOXL4Q96JB6 756 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 KCNK17Q96T54 332 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 ZDHHC11Q9H8X9 412 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 ELOVL5Q9NYP7 299 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 VDAC3Q9Y277 283 aa11.92□□□□□ -0.5
HDAC1-206ENST00000476391 IGHV1-69-2A0A0G2JMI3 117 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 A0A1W2PNV4 684 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 K7ERU9 68 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 IL33O95760 270 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 NBEAP1P0C6P0 100 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 VDAC1P21796 283 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 S100A7P31151 101 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 APOBEC3AP31941 199 aaPredicted RBP11.91□□□□□ -0.5
HDAC1-206ENST00000476391 BMI1P35226 326 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 LHX2P50458 406 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 RRADP55042 308 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 HERV-K104P61576 105 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 FUT7Q11130 342 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 NMSQ5H8A3 153 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 C16orf54Q6UWD8 224 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 UEVLDQ8IX04 471 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 SELENOHQ8IZQ5 122 aaKnown RBP11.91□□□□□ -0.5
HDAC1-206ENST00000476391 PNKDQ8N490 385 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 Q96M66 194 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 MRPL27Q9P0M9 148 aaKnown RBP11.91□□□□□ -0.5
HDAC1-206ENST00000476391 UBE2J1Q9Y385 318 aaPredicted RBP11.91□□□□□ -0.5
HDAC1-206ENST00000476391 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 ZNF205O95201 554 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 UTS2O95399 124 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 WNT2P09544 360 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 TSPOP30536 169 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 OPRM1P35372 400 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 DAP3P51398 398 aaKnown RBP11.91□□□□□ -0.5
HDAC1-206ENST00000476391 Q0VG73 95 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 ZP4Q12836 540 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 C1orf185Q5T7R7 199 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 Q6ZVH6 145 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 SIGLECL1Q8N7X8 197 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 Q8NFD4 153 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 DGAT2Q96PD7 388 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 FBXL7Q9UJT9 491 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 INSL6Q9Y581 213 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 ADAMTS9Q9P2N4 1935 aa11.91□□□□□ -0.5
HDAC1-206ENST00000476391 NRASP01111 189 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 KRASP01116 189 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 CEACAM5P06731 702 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 C8AP07357 584 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 HLA-DOBP13765 273 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 HINT1P49773 126 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-206ENST00000476391 ARF6P62330 175 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 MESP2Q0VG99 397 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 PLPPR5Q32ZL2 321 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 FFAR4Q5NUL3 377 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 PSMF1Q92530 271 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 ZNF160Q9HCG1 818 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 FAM60AQ9NP50 221 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 SLC17A4Q9Y2C5 497 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 WNT6Q9Y6F9 365 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 OR5B21A6NL26 309 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 VSTM2BA6NLU5 285 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 ZNF814B7Z6K7 855 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 NPIPA5E9PKD4 350 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 TGFBR3LH3BV60 316 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 SLC33A1O00400 549 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-206ENST00000476391 WASP42768 502 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 ZNF121P58317 390 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-206ENST00000476391 IGLV3-21P80748 117 aaPredicted RBP11.9□□□□□ -0.5
HDAC1-206ENST00000476391 VAMP3Q15836 100 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 CDCP2Q5VXM1 449 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 LHFPL4Q7Z7J7 247 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 OR2M7Q8NG81 312 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 OR4F5Q8NH21 305 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 OR4F4Q96R69 305 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.9□□□□□ -0.5
HDAC1-206ENST00000476391 CLN8Q9UBY8 286 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 NPIPA1Q9UND3 350 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 RNF24Q9Y225 148 aa11.9□□□□□ -0.5
HDAC1-206ENST00000476391 IGHV2-26A0A0B4J1V2 119 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 NPIPB13A6NJU9 1138 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 NPIPB4C9JG80 1138 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 GP1BBP13224 206 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 KRTDAPP60985 99 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 LRRC75BQ2VPJ9 315 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 FAM3CQ92520 227 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 RAB40CQ96S21 281 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 UBE2ZQ9H832 354 aaPredicted RBP11.89□□□□□ -0.51
HDAC1-206ENST00000476391 CCDC163A0A0D9SF12 145 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 A0A1W2PRS3 328 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 SERPINA7P05543 415 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 GPX1P07203 203 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 CCR2P41597 374 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 TESK1Q15569 626 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 ZNF77Q15935 545 aa11.89□□□□□ -0.51
HDAC1-206ENST00000476391 BAGE3Q86Y29 109 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms