RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 OR1N2Q8NGR9 330 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 OR2T10Q8NGZ9 312 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 MRGPRDQ8TDS7 321 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 DCUN1D4Q92564 292 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 SPSB1Q96BD6 273 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 UBE2E2Q96LR5 201 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 KCTD7Q96MP8 289 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 OPALINQ96PE5 141 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 SPACA5Q96QH8 159 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 S1PR3Q99500 378 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 ELAC2Q9BQ52 826 aaKnown RBP3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 TEX12Q9BXU0 123 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF556Q9HAH1 456 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 ARL8BQ9NVJ2 186 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 NDE1Q9NXR1 346 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 TAGLN3Q9UI15 199 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 KIF25Q9UIL4 384 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 VSIG4Q9Y279 399 aa3.97□□□□□ -1.77
SNRNP40-204ENST00000474025 MEIKINA0A087WXM9 373 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 TRAV24A0A0B4J272 114 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 A0A1W2PQL4 384 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 METTL15A6NJ78 407 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 A8MZ25 164 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF736B4DX44 427 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 H0YJX3 145 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 RGS13O14921 159 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 DEGS1O15121 323 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 SLC25A17O43808 307 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 SNX3O60493 162 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 SULT1C4O75897 302 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 MOSP00540 346 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 MT-ND2P03891 347 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 GAPDHP04406 335 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 OR5H8P0DN80 308 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ANXA8P13928 327 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ATF1P18846 271 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 CD1BP29016 333 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 C21orf33P30042 268 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 PPIFP30405 207 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 HTR1FP30939 366 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 SOX6P35712 828 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 MNAT1P51948 309 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 CRISP1P54107 249 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 F2RL1P55085 397 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ZP1P60852 638 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ISL1P61371 349 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 EFNB1P98172 346 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 MS4A2Q01362 244 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 PAX5Q02548 391 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 GABPB1Q06547 395 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 TRIM25Q14258 630 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 SRSF7Q16629 238 aaKnown RBP eCLIP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 PAN3Q58A45 887 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 RSBN1Q5VWQ0 802 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 NXNL2Q5VZ03 156 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ACSM6Q6P461 480 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 SAXO1Q8IYX7 474 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 Q8N1Y9 231 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ARHGAP24Q8N264 748 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF565Q8N9K5 539 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 OR10A7Q8NGE5 316 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 OR6Q1Q8NGQ2 317 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 RFESDQ8TAC1 157 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 RTN4IP1Q8WWV3 396 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 DLX4Q92988 240 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ST6GALNAC6Q969X2 333 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 FGGYQ96C11 551 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 RBMXL1Q96E39 390 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 OR5B12Q96R08 314 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 MBOAT4Q96T53 435 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 TBX5Q99593 518 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 RASL11BQ9BPW5 248 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ADI1Q9BV57 179 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ALX4Q9H161 411 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 NCOR1P1Q9H4R4 102 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 RHOFQ9HBH0 211 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 KRT84Q9NSB2 600 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 C19orf73Q9NVV2 129 aa3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 ARGLU1Q9NWB6 273 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-204ENST00000474025 TRAV39A0A0B4J263 110 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 MAGEA13PA6NCF6 341 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 FAM90A10PA6NDY2 464 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 G3V318 75 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 GNGT2O14610 69 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 HSPA12AO43301 675 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 APOL3O95236 402 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 ISG15P05161 165 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 OR2T7P0C7T2 308 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 SLC2A2P11168 524 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF20P17024 532 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 MYF6P23409 242 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 EPHA2P29317 976 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 MTNR1BP49286 362 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 ZNF137PP52743 207 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 SLURP1P55000 103 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 PTGES3Q15185 160 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 TMEM244Q5VVB8 128 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 FAHD1Q6P587 224 aa3.95□□□□□ -1.78
SNRNP40-204ENST00000474025 TMEM65Q6PI78 240 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms