RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 PID1Q7Z2X4 250 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 TMEM61Q8N0U2 210 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 ZNF567Q8N184 647 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 DEFB125Q8N687 156 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 PRELID2Q8N945 189 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 C15orf53Q8NAA6 179 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 GATSQ8NAP1 163 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 C19orf18Q8NEA5 215 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 OR1L4Q8NGR5 311 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 ZNF420Q8TAQ5 688 aaPredicted RBP2.51□□□□□ -2.01
VPS13A-210ENST00000471439 PIGXQ8TBF5 258 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 RGP1Q92546 391 aaPredicted RBP2.51□□□□□ -2.01
VPS13A-210ENST00000471439 SEC22AQ96IW7 307 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 CYYR1Q96J86 154 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 CLCC1Q96S66 551 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 HIST1H4GQ99525 98 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 SELENOIQ9C0D9 397 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 NDEL1Q9GZM8 345 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 MFFQ9GZY8 342 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 NHEJ1Q9H9Q4 299 aaPredicted RBP2.51□□□□□ -2.01
VPS13A-210ENST00000471439 MAT2BQ9NZL9 334 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 KCNIP3Q9Y2W7 256 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 COMMD3-BMI1R4GMX3 469 aa2.51□□□□□ -2.01
VPS13A-210ENST00000471439 LOC110117498-PIK3R3F6TDL0 507 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 SCELO95171 688 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 CD74P04233 296 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 DBTP11182 482 aaKnown RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 CD79AP11912 226 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 CCL2P13500 99 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 RCC1P18754 421 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 PRPS1L1P21108 318 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 FDFT1P37268 417 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 MPV17P39210 176 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 SLC1A1P43005 524 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 GPM6AP51674 278 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 ZNF133P52736 654 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 TAS2R19P59542 299 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 SLC25A11Q02978 314 aaKnown RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 TGM3Q08188 693 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 MAB21L1Q13394 359 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 POU6F1Q14863 301 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 TOMM34Q15785 309 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 EXOC3L4Q17RC7 722 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 SAMD4BQ5PRF9 694 aaKnown RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 AAED1Q7RTV5 226 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 LINC00596Q86U02 117 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 UBE2DNLQ8IWF7 75 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 DRAM1Q8N682 238 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 ZIC4Q8N9L1 334 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 TTLQ8NG68 377 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 OR7G2Q8NG99 324 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 RPS4Y2Q8TD47 263 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 BIRC8Q96P09 236 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 OLFM3Q96PB7 478 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 ALS2CR12Q96Q35 445 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 CCT7Q99832 543 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 RASL11BQ9BPW5 248 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 ROPN1BQ9BZX4 212 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 ROGDIQ9GZN7 287 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 WFDC10AQ9H1F0 79 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 SLC25A22Q9H936 323 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 ANKRA2Q9H9E1 313 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 ZNF331Q9NQX6 463 aaPredicted RBP2.5□□□□□ -2.01
VPS13A-210ENST00000471439 MS4A12Q9NXJ0 267 aa2.5□□□□□ -2.01
VPS13A-210ENST00000471439 F8VZ95 297 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 UTS2O95399 124 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 FSTL3O95633 263 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 IFNA5P01569 189 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 RPS3P23396 243 aaKnown RBP eCLIP2.49□□□□□ -2.01
VPS13A-210ENST00000471439 SSR2P43308 183 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 KIR3DL2P43630 455 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 XKP51811 444 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 SH3BGRP55822 239 aaPredicted RBP2.49□□□□□ -2.01
VPS13A-210ENST00000471439 LRRC63Q05C16 580 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 SELENBP1Q13228 472 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 PMS2P3Q13401 168 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 OR5I1Q13606 314 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 PDK2Q15119 407 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 MICBQ29980 383 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 LRRC23Q53EV4 343 aaPredicted RBP2.49□□□□□ -2.01
VPS13A-210ENST00000471439 GDPD3Q7L5L3 318 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 ZNF546Q86UE3 836 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 LY6G5BQ8NDX9 201 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 BHLHE23Q8NDY6 225 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 OR1N2Q8NGR9 330 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 C4orf3Q8WVX3 66 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 FCRL1Q96LA6 429 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 OR4C12Q96R67 309 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 FMO2Q99518 471 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 EBPLQ9BY08 206 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 CCL28Q9NRJ3 127 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 PARVAQ9NVD7 372 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 ADA2Q9NZK5 511 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 LINC00527Q9UJ94 153 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 PIGLQ9Y2B2 252 aa2.49□□□□□ -2.01
VPS13A-210ENST00000471439 C11orf94C9JXX5 98 aa2.48□□□□□ -2.01
VPS13A-210ENST00000471439 AGPAT2O15120 278 aa2.48□□□□□ -2.01
VPS13A-210ENST00000471439 NDUFB2O95178 105 aa2.48□□□□□ -2.01
VPS13A-210ENST00000471439 IFNA21P01568 189 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms