RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 GABRG3Q99928 467 aa11.85□□□□□ -0.51
NPHP4-207ENST00000470763 TRAV1-1A0A0B4J248 108 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 OR3A1P47881 315 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 BSXQ3C1V8 233 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF818PQ6ZRF7 136 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF442Q9H7R0 627 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF705FA8MVS1 300 aaPredicted RBP11.84□□□□□ -0.51
NPHP4-207ENST00000470763 IGLV3-1P01715 115 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 RPLP1P05386 114 aaKnown RBP11.84□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF705DP0CH99 300 aaPredicted RBP11.84□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF705BP0CI00 300 aaPredicted RBP11.84□□□□□ -0.51
NPHP4-207ENST00000470763 EDN3P14138 238 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 C17orf67Q0P5P2 114 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF774Q6NX45 483 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 DPPA3Q6W0C5 159 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 GAPTQ8N292 157 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 PRSS33Q8NF86 280 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 OR2V1Q8NHB1 315 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 PLPPR1Q8TBJ4 325 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 OPN3Q9H1Y3 402 aaPredicted RBP11.84□□□□□ -0.51
NPHP4-207ENST00000470763 NAT8Q9UHE5 227 aa11.84□□□□□ -0.51
NPHP4-207ENST00000470763 IGKV1-12A0A0C4DH73 117 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 IGKV1D-12P01611 117 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 UCP3P55916 312 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 ID3Q02535 119 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 IL24Q13007 206 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 TMEM105Q8N8V8 129 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 ZNF441Q8N8Z8 693 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 PYGO2Q9BRQ0 406 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 PLK3Q9H4B4 646 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 WNT16Q9UBV4 365 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 ST3GAL6Q9Y274 331 aa11.83□□□□□ -0.51
NPHP4-207ENST00000470763 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 M0R135 149 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 PDLIM4P50479 330 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 SRPXP78539 464 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 TESK1Q15569 626 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 TMEM241Q24JQ0 296 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF799Q96GE5 643 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 TMEM56Q96MV1 263 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 KLRF1Q9NZS2 232 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 TMEM56-RWDD3S4R434 201 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
NPHP4-207ENST00000470763 A0A0U1RQV5 110 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 A0A1W2PR80 420 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 CNOT4O95628 575 aaKnown RBP11.83□□□□□ -0.52
NPHP4-207ENST00000470763 IRF2P14316 349 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 RPL23P62829 140 aaKnown RBP11.83□□□□□ -0.52
NPHP4-207ENST00000470763 NMSQ5H8A3 153 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 CALHM1Q8IU99 346 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 SDSLQ96GA7 329 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 DIRC2Q96SL1 478 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 OBP2AQ9NY56 170 aa11.83□□□□□ -0.52
NPHP4-207ENST00000470763 H3BMH7 237 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF737O75373 536 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 METTL15P1P0C7V9 234 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 SRFP11831 508 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 GUCA1AP43080 201 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-207ENST00000470763 ZNF41P51814 821 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-207ENST00000470763 TCF15Q12870 199 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 TMEM256Q8N2U0 113 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 SCGB1C1Q8TD33 95 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 FAM122AQ96E09 287 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 PLEK2Q9NYT0 353 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 TAAR3PQ9P1P4 343 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 NAGKQ9UJ70 344 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 RNF115Q9Y4L5 304 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 IGKV1D-13A0A0B4J2D9 117 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 KIR2DL5BA0A0G2JN68 375 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 KIR2DL5BA0A0G2JPC4 375 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 A0A0G2JRQ6 117 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 OR7C1O76099 320 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-207ENST00000470763 IGKV1-13P0DP09 117 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 FAM3BP58499 235 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-207ENST00000470763 ARSJQ5FYB0 599 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-207ENST00000470763 CST9LP1Q5W188 147 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 KIR2DL5AQ8N109 375 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 GBGT1Q8N5D6 347 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
NPHP4-207ENST00000470763 NUPR1O60356 82 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 IAPPP10997 89 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 TNFRSF4P43489 277 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 ACTL10Q5JWF8 245 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 PHYHD1Q5SRE7 291 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 CYP2G1PQ6ZSU1 146 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 OSR2Q8N2R0 312 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 BORCS8Q96FH0 119 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 TBX15Q96SF7 602 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 P2RX4Q99571 388 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 HIPK2Q9H2X6 1198 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 HRASP01112 189 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 VDAC1P21796 283 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 CCKARP32238 428 aa11.81□□□□□ -0.52
NPHP4-207ENST00000470763 MDH2P40926 338 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms