RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 GPR50Q13585 617 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 LTC4SQ16873 150 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 CCDC144NLQ6NUI1 221 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 NEK7Q8TDX7 302 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 TMED9Q9BVK6 235 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 ANKRD60Q9BZ19 345 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 VCX3BQ9H321 246 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 BANF2Q9H503 90 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 LIN7BQ9HAP6 207 aa13.69□□□□□ -0.22
SSBP1-207ENST00000468267 AMMECR1Q9Y4X0 333 aaPredicted RBP13.69□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A10PA6NDY2 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A18PA6NE21 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A16PA6NEW6 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A20PA6NIJ5 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A7PA6NKC0 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A12PA8MX19 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A5PA8MXJ8 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A23PA8MXZ1 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 C15orf65H3BRN8 121 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 CSF1P09603 554 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A15PP0C7V4 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A13PP0C7W8 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A14PP0C7W9 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A24PP0C7X0 464 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 MNDAP41218 407 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 MED22Q15528 200 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 FAM27D1Q5T7N8 215 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 C11orf44Q8N8P7 122 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 TMEM104Q8NE00 496 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 WIPF2Q8TF74 440 aaPredicted RBP13.68□□□□□ -0.22
SSBP1-207ENST00000468267 CCDC107Q8WV48 283 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 PHYHIPQ92561 330 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 ARL11Q969Q4 196 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 RPEQ96AT9 228 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 AKR1E2Q96JD6 320 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 SELENOIQ9C0D9 397 aa13.68□□□□□ -0.22
SSBP1-207ENST00000468267 ERICH4A6NGS2 130 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 MCRIP1C9JLW8 97 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 ORC5O43913 435 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 CRTAPO75718 401 aaPredicted RBP13.67□□□□□ -0.22
SSBP1-207ENST00000468267 MGMTP16455 207 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 MADCAM1Q13477 382 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 FBLN7Q53RD9 439 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 HIST2H2BDQ6DRA6 164 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 RAB12Q6IQ22 244 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 LRRTM1Q86UE6 522 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 OR52M1Q8NGK5 317 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 FAM110DQ8TAY7 271 aaPredicted RBP13.67□□□□□ -0.22
SSBP1-207ENST00000468267 TOMM40LQ969M1 308 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 Q96M66 194 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 RBM14Q96PK6 669 aaKnown RBP13.67□□□□□ -0.22
SSBP1-207ENST00000468267 OCSTAMPQ9BR26 566 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 SLC25A33Q9BSK2 321 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 WNT10AQ9GZT5 417 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 GHRLQ9UBU3 117 aa13.67□□□□□ -0.22
SSBP1-207ENST00000468267 FAM90A9PA6NNJ1 464 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 AIPO00170 330 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 RGS10O43665 173 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 SC5DO75845 299 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 OR2F2O95006 317 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 GLAP06280 429 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 FUT3P21217 361 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 VDAC2P45880 294 aaPredicted RBP13.66□□□□□ -0.22
SSBP1-207ENST00000468267 GNG10P50151 68 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 ARSJQ5FYB0 599 aaPredicted RBP13.66□□□□□ -0.22
SSBP1-207ENST00000468267 LIPKQ5VXJ0 399 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 CEACAM19Q7Z692 300 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 THNSL2Q86YJ6 484 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 GAPTQ8N292 157 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 OR10X1Q8NGY0 326 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 CAPSLQ8WWF8 208 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 ETAA1Q9NY74 926 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 PEX16Q9Y5Y5 336 aa13.66□□□□□ -0.22
SSBP1-207ENST00000468267 PRKDCP78527 4128 aaKnown RBP13.66□□□□□ -0.22
SSBP1-207ENST00000468267 SDCBPO00560 298 aaPredicted RBP13.65□□□□□ -0.22
SSBP1-207ENST00000468267 PLXNB1O43157 2135 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 WIPF1O43516 503 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 PEX14O75381 377 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 FBXO24O75426 580 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 UCHL1P09936 223 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 UBBP0CG47 229 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 CD28P10747 220 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 CD37P11049 281 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 SRMP19623 302 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 CRHBPP24387 322 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 VHLP40337 213 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 HSPA13P48723 471 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 LOXL3P58215 753 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 TPBGQ13641 420 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 DIAPH2-AS1Q14236 149 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 HSD17B12Q53GQ0 312 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 C1orf100Q5SVJ3 147 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 SYT6Q5T7P8 510 aaPredicted RBP13.65□□□□□ -0.22
SSBP1-207ENST00000468267 DMRTA1Q5VZB9 504 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 GLT8D1Q68CQ7 371 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 SIGIRRQ6IA17 410 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 UBALD1Q8TB05 177 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 UFD1Q92890 307 aa13.65□□□□□ -0.22
SSBP1-207ENST00000468267 CST11Q9H112 138 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms