RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 EAF1Q96JC9 268 aaPredicted RBP17.95■□□□□ 0.46
USP42-205ENST00000465073 METTL9Q9H1A3 318 aa17.95■□□□□ 0.46
USP42-205ENST00000465073 IL36GQ9NZH8 169 aa17.95■□□□□ 0.46
USP42-205ENST00000465073 RPL36Q9Y3U8 105 aaKnown RBP17.95■□□□□ 0.46
USP42-205ENST00000465073 TMEM30CPA0ZSE6 113 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 NCBP2LA6PVI3 153 aaKnown RBP17.94■□□□□ 0.46
USP42-205ENST00000465073 H0YHG0 523 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 AP4M1O00189 453 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 OR7C1O76099 320 aaPredicted RBP17.94■□□□□ 0.46
USP42-205ENST00000465073 GP2P55259 537 aaKnown RBP17.94■□□□□ 0.46
USP42-205ENST00000465073 RBM11P57052 281 aaKnown RBP17.94■□□□□ 0.46
USP42-205ENST00000465073 KLHL22Q53GT1 634 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 IZUMO1Q8IYV9 350 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 C8orf31Q8N9H6 132 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 OR52N1Q8NH53 320 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 RGP1Q92546 391 aaPredicted RBP17.94■□□□□ 0.46
USP42-205ENST00000465073 GON7Q9BXV9 100 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 TMEM138Q9NPI0 162 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 ING4Q9UNL4 249 aa17.94■□□□□ 0.46
USP42-205ENST00000465073 CDRT1O95170 752 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 CSTBP04080 98 aaKnown RBP17.93■□□□□ 0.46
USP42-205ENST00000465073 GTF2A1P52655 376 aaPredicted RBP17.93■□□□□ 0.46
USP42-205ENST00000465073 DGCR2P98153 550 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 PNLIPRP3Q17RR3 467 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 LINC00596Q86U02 117 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 LINC00311Q8N616 119 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 OR2T10Q8NGZ9 312 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 WWC2-AS2Q96NR7 200 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 ABCG5Q9H222 651 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 LIN7CQ9NUP9 197 aaKnown RBP17.93■□□□□ 0.46
USP42-205ENST00000465073 ZNF581Q9P0T4 197 aa17.93■□□□□ 0.46
USP42-205ENST00000465073 KMT2CQ8NEZ4 4911 aaKnown RBP17.93■□□□□ 0.46
USP42-205ENST00000465073 IGHV3-72A0A0B4J1Y9 119 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 LINC01548A6NM66 108 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 CCL24O00175 119 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 GPR12P47775 334 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 REG1BP48304 166 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 PPP3R1P63098 170 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 CCDC58Q4VC31 144 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 RPL22L1Q6P5R6 122 aaKnown RBP17.92■□□□□ 0.46
USP42-205ENST00000465073 Q8N6K4 173 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 ARL11Q969Q4 196 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 RAX2Q96IS3 184 aa17.92■□□□□ 0.46
USP42-205ENST00000465073 PAK1IP1Q9NWT1 392 aaPredicted RBP17.92■□□□□ 0.46
USP42-205ENST00000465073 C15orf65H3BRN8 121 aa17.91■□□□□ 0.46
USP42-205ENST00000465073 SDCBPO00560 298 aaPredicted RBP17.91■□□□□ 0.46
USP42-205ENST00000465073 TMEM106AQ96A25 262 aa17.91■□□□□ 0.46
USP42-205ENST00000465073 S100A13Q99584 98 aa17.91■□□□□ 0.46
USP42-205ENST00000465073 GEMIN2O14893 280 aaKnown RBP17.9■□□□□ 0.46
USP42-205ENST00000465073 ORC5O43913 435 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 RAMP3O60896 148 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 LIMS3P0CW19 117 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 LIMS4P0CW20 117 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 IL3RAP26951 378 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 CD1BP29016 333 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 ZNF93P35789 620 aaPredicted RBP17.9■□□□□ 0.46
USP42-205ENST00000465073 MPV17LQ2QL34 196 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 Q8N9W7 124 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 ST6GALNAC6Q969X2 333 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 DUX3Q96PT4 197 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 C9orf16Q9BUW7 83 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 DCLRE1BQ9H816 532 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 GFOD1Q9NXC2 390 aa17.9■□□□□ 0.46
USP42-205ENST00000465073 LOC100130705A0A1B0GUX0 176 aa17.89■□□□□ 0.45
USP42-205ENST00000465073 FOXE3Q13461 319 aa17.89■□□□□ 0.45
USP42-205ENST00000465073 Q3ZCU0 254 aa17.89■□□□□ 0.45
USP42-205ENST00000465073 CXorf66Q5JRM2 361 aaPredicted RBP17.89■□□□□ 0.45
USP42-205ENST00000465073 ATAD3CQ5T2N8 411 aa17.89■□□□□ 0.45
USP42-205ENST00000465073 DDI2Q5TDH0 399 aa17.89■□□□□ 0.45
USP42-205ENST00000465073 TMEM104Q8NE00 496 aa17.89■□□□□ 0.45
USP42-205ENST00000465073 RTN4IP1Q8WWV3 396 aaPredicted RBP17.89■□□□□ 0.45
USP42-205ENST00000465073 FGF20Q9NP95 211 aaPredicted RBP17.89■□□□□ 0.45
USP42-205ENST00000465073 ZNF780AO75290 641 aaPredicted RBP17.88■□□□□ 0.45
USP42-205ENST00000465073 MOSP00540 346 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 MT-ND4P03905 459 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 RPLP1P05386 114 aaKnown RBP17.88■□□□□ 0.45
USP42-205ENST00000465073 VSIG8P0DPA2 414 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 BDKRB2P30411 391 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 RAB25P57735 213 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 GPR50Q13585 617 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 KIR2DS1Q14954 304 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 XAF1Q6GPH4 301 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 ZNF497Q6ZNH5 498 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 C10orf67Q8IYJ2 551 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 RNF152Q8N8N0 203 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 OR8H1Q8NGG4 311 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 OR8U1Q8NH10 309 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 NEK7Q8TDX7 302 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 CCDC107Q8WV48 283 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 TFAP2CQ92754 450 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 PLSCR3Q9NRY6 295 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 NHLRC4P0CG21 123 aaPredicted RBP17.88■□□□□ 0.45
USP42-205ENST00000465073 SERPINA2P20848 420 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 CDX1P47902 265 aaPredicted RBP17.88■□□□□ 0.45
USP42-205ENST00000465073 TMPRSS11AQ6ZMR5 421 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 STX19Q8N4C7 294 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 SLC29A1Q99808 456 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 RASL11BQ9BPW5 248 aa17.88■□□□□ 0.45
USP42-205ENST00000465073 DNAH9Q9NYC9 4486 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 AIPO00170 330 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms