RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 MADCAM1Q13477 382 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 C6orf141Q5SZD1 244 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 ZNF497Q6ZNH5 498 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 SLC16A12Q6ZSM3 486 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 LYG1Q8N1E2 194 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 NKAIN3Q8N8D7 197 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 CAPSLQ8WWF8 208 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 SPACA1Q9HBV2 294 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 TGP01266 2768 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 A0A1W2PPI3 338 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 PTGES3LE9PB15 166 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 C15orf65H3BRN8 121 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 OPN1MWP04001 364 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 AMY1AP04745 511 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 AMY2AP04746 511 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 OPN1MW2P0DN77 364 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 OPN1MW3P0DN78 364 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 GZMHP20718 246 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 INSL4Q14641 139 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 ABCA11PQ4W5N1 156 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 TMEM104Q8NE00 496 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 SGCDQ92629 289 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 MYDGFQ969H8 173 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 UQCC2Q9BRT2 126 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 BANF2Q9H503 90 aa15.1■□□□□ 0.01
COL5A1-203ENST00000460264 LSM2Q9Y333 95 aaKnown RBP15.1■□□□□ 0.01
COL5A1-203ENST00000460264 AIPO00170 330 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 MT-ND4P03905 459 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 MGMTP16455 207 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 GABPB1Q06547 395 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-203ENST00000460264 DIAPH2-AS1Q14236 149 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 NSUN5P1Q3KNT7 163 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 RAB12Q6IQ22 244 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 NDUFA11Q86Y39 141 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 OR10X1Q8NGY0 326 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 OR56B4Q8NH76 319 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 UBALD1Q8TB05 177 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 CCDC107Q8WV48 283 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 ARL11Q969Q4 196 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 Q96M66 194 aa15.09■□□□□ 0.01
COL5A1-203ENST00000460264 CITED2Q99967 270 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-203ENST00000460264 A0A1W2PPE3 182 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A10PA6NDY2 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A18PA6NE21 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A16PA6NEW6 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A20PA6NIJ5 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A7PA6NKC0 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A9PA6NNJ1 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 ADARB2-AS1A8MUL3 147 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A12PA8MX19 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A5PA8MXJ8 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A23PA8MXZ1 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 MCRIP1C9JLW8 97 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 SDCBPO00560 298 aaPredicted RBP15.08■□□□□ 0
COL5A1-203ENST00000460264 ORC5O43913 435 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 LPLP06858 475 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 SNRNP70P08621 437 aaKnown RBP15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A15PP0C7V4 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A13PP0C7W8 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A14PP0C7W9 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM90A24PP0C7X0 464 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM106CPP0CH98 169 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 RAB7AP51149 207 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 GP2P55259 537 aaKnown RBP15.08■□□□□ 0
COL5A1-203ENST00000460264 SPHARQ15513 63 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 FAM27D1Q5T7N8 215 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 UNQ9370/PRO34162Q6UXP9 181 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 THNSL2Q86YJ6 484 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 C1QL4Q86Z23 238 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 MS4A15Q8N5U1 240 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 DRAM1Q8N682 238 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 OR52M1Q8NGK5 317 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 TMED9Q9BVK6 235 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 SELENOIQ9C0D9 397 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 SCN3BQ9NY72 215 aa15.08■□□□□ 0
COL5A1-203ENST00000460264 M0QZK8 103 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 CRTAPO75718 401 aaPredicted RBP15.07■□□□□ 0
COL5A1-203ENST00000460264 LOXL3P58215 753 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 SLC35A2P78381 396 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 IRF3Q14653 427 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 ACSM3Q53FZ2 586 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 OR8H3Q8N146 312 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 GAPTQ8N292 157 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 OR5AU1Q8NGC0 362 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 GFOD1Q9NXC2 390 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 ETAA1Q9NY74 926 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 MOB4Q9Y3A3 225 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 PEX16Q9Y5Y5 336 aa15.07■□□□□ 0
COL5A1-203ENST00000460264 SH2D7A6NKC9 451 aaPredicted RBP15.06■□□□□ 0
COL5A1-203ENST00000460264 C12orf77C9JDV5 145 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 HSD17B6O14756 317 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 VHLP40337 213 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 EMX1Q04741 257 aaPredicted RBP15.06■□□□□ 0
COL5A1-203ENST00000460264 GPR50Q13585 617 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 MED22Q15528 200 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 SIGIRRQ6IA17 410 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 FAM53AQ6NSI3 398 aaPredicted RBP15.06■□□□□ 0
COL5A1-203ENST00000460264 LRRTM1Q86UE6 522 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 C8orf31Q8N9H6 132 aa15.06■□□□□ 0
COL5A1-203ENST00000460264 PHYHIPQ92561 330 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms