RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SUCNR1Q9BXA5 334 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 SDHAF2Q9NX18 166 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 LRP5LA4QPB2 252 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 F5H0A9 414 aaPredicted RBP9.07□□□□□ -0.96
PKP4-206ENST00000452162 HSPB6O14558 160 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 SHOXO15266 292 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 GLAP06280 429 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 SCTP09683 121 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 PET100P0DJ07 73 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 ZNF250P15622 560 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 UCP2P55851 309 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 HERPUD1Q15011 391 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 IAH1Q2TAA2 248 aaPredicted RBP9.07□□□□□ -0.96
PKP4-206ENST00000452162 ALKBH6Q3KRA9 238 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 FAM219AQ8IW50 185 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 DMRTC2Q8IXT2 367 aaPredicted RBP9.07□□□□□ -0.96
PKP4-206ENST00000452162 OR11L1Q8NGX0 322 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 LILRB1Q8NHL6 650 aaPredicted RBP9.07□□□□□ -0.96
PKP4-206ENST00000452162 LRRC46Q96FV0 321 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 AQP10Q96PS8 301 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 GSKIPQ9P0R6 139 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 DNAJB11Q9UBS4 358 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 KCNIP3Q9Y2W7 256 aa9.07□□□□□ -0.96
PKP4-206ENST00000452162 AKAP6Q13023 2319 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 TACC2O95359 2948 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 TRDCB7Z8K6 153 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 C3orf80F5H4A9 247 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 CCKARP32238 428 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 KCNJ3P48549 501 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 ERVK11-1P61568 191 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 PSG7Q13046 419 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 SP6Q3SY56 376 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 FAM74A1Q5RGS3 127 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 Q6P435 159 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 ZNF880Q6PDB4 577 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 BEND4Q6ZU67 534 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 LINC00469Q8N7U9 141 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 SCCPDHQ8NBX0 429 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 OR1J1Q8NGS3 322 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 LINC01560Q8TB33 94 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 MSI2Q96DH6 328 aaKnown RBP9.06□□□□□ -0.96
PKP4-206ENST00000452162 C18orf12Q96KH6 178 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 ADAT1Q9BUB4 502 aaKnown RBP9.06□□□□□ -0.96
PKP4-206ENST00000452162 RIMS4Q9H426 269 aaPredicted RBP9.06□□□□□ -0.96
PKP4-206ENST00000452162 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
PKP4-206ENST00000452162 ATP23Q9Y6H3 246 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 IGKV1-6A0A0C4DH72 117 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 KIR2DS1A0A191URI9 304 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 TUSC2O75896 110 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 IFNA21P01568 189 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 SELEP16581 610 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 KIR2DS4P43632 304 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 KIR2DS1Q14954 304 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 C20orf204Q6ZNR8 217 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 LIAT1Q6ZQX7 453 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 CXorf67Q86X51 503 aaPredicted RBP9.06□□□□□ -0.96
PKP4-206ENST00000452162 CCDC28AQ8IWP9 274 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 CCDC71LQ8N9Z2 235 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 SPERTQ8NA61 448 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 OR5T2Q8NGG2 359 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 NEK7Q8TDX7 302 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 SYT3Q9BQG1 590 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 C1QTNF6Q9BXI9 259 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 ELOVL5Q9NYP7 299 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 PFDN2Q9UHV9 154 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 FBN2P35556 2912 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 ROS1P08922 2347 aa9.06□□□□□ -0.96
PKP4-206ENST00000452162 HRNRQ86YZ3 2850 aaPredicted RBP9.05□□□□□ -0.96
PKP4-206ENST00000452162 H7C1Q1 480 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 COX6B1P14854 86 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 GNRHRP30968 328 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 HOXC12P31275 282 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 MPV17P39210 176 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 S100A10P60903 97 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 NAAAQ02083 359 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 UNQ6126/PRO20091Q6UXV3 157 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 C22orf34Q6ZV56 151 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 LDLRAD3Q86YD5 345 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 KLF14Q8TD94 323 aaPredicted RBP9.05□□□□□ -0.96
PKP4-206ENST00000452162 GLYATL2Q8WU03 294 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 RDH5Q92781 318 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 NRIP2Q9BQI9 281 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 SHARPINQ9H0F6 387 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 BARX1Q9HBU1 254 aaPredicted RBP9.05□□□□□ -0.96
PKP4-206ENST00000452162 POLDIP2Q9Y2S7 368 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 CADP27708 2225 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 HS3ST1O14792 307 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 BET1O15155 118 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 DIRAS3O95661 229 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 IGLV1-44P01699 117 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 TK1P04183 234 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 CECR9P0C854 216 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 PGA5P0DJD9 388 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 NUP62P37198 522 aaPredicted RBP9.05□□□□□ -0.96
PKP4-206ENST00000452162 RND3P61587 244 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 ZNF154Q13106 437 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 LYZL2Q7Z4W2 148 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 Q8IYB0 196 aa9.05□□□□□ -0.96
PKP4-206ENST00000452162 FAM185AQ8N0U4 392 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms