RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 QPCTLQ9NXS2 382 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 EXTL2Q9UBQ6 330 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 TBC1D24Q9ULP9 559 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 NDRG2Q9UN36 371 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 SIGLEC7Q9Y286 467 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 YARS2Q9Y2Z4 477 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF337Q9Y3M9 751 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CDH23Q9H251 3354 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CEP290O15078 2479 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 SCN2AQ99250 2005 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 A0A087WUJ7 227 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TRAV1-2A0A0B4J238 106 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 IGHV1OR15-9A0A0B4J2B8 117 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 LINC00854A0A1B0GVQ3 168 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 PDCD5O14737 125 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 PHYHO14832 338 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 LYRM1O43325 122 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 DNAJB6O75190 326 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 REM1O75628 298 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 GATBO75879 557 aaKnown RBP2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 ATP5LO75964 103 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR7A10O76100 309 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 MOSP00540 346 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 P04436 131 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TACSTD2P09758 323 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 PSKH1P11801 424 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 RAB3BP20337 219 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 SLC2A5P22732 501 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 HLA-DMAP28067 261 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 IL12BP29460 328 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 RORAP35398 523 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CD79BP40259 229 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 NAA10P41227 235 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TGM4P49221 684 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 GDI2P50395 445 aaKnown RBP2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 LHX2P50458 406 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 UCNP55089 124 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 DLX1P56177 255 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CAV3P56539 151 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 FXYD6P3P58550 94 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TAS2R19P59542 299 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 PPP1CAP62136 330 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 PITPNAQ00169 270 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 SELENBP1Q13228 472 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 GGTLC2Q14390 218 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CDK5R1Q15078 307 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 PON3Q15166 354 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 KCNJ8Q15842 424 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CCDC58Q4VC31 144 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 HSD17B12Q53GQ0 312 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 IDNKQ5T6J7 187 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TIGD3Q6B0B8 471 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 RPL22L1Q6P5R6 122 aaKnown RBP2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 NPSR1Q6W5P4 371 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 Q6ZS52 159 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 NANOGNBQ7Z5D8 188 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM71E2Q8N5Q1 922 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CYB561A3Q8NBI2 242 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 SDR9C7Q8NEX9 313 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR52H1Q8NGJ2 320 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR52E2Q8NGJ4 325 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR52M1Q8NGK5 317 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR2T27Q8NH04 317 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR4K13Q8NH42 304 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR51Q1Q8NH59 317 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR51A7Q8NH64 312 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF563Q8TA94 476 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 DOK4Q8TEW6 326 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CAPSLQ8WWF8 208 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 ARPC1AQ92747 370 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CREB3L1Q96BA8 519 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 SMIM19Q96E16 107 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZMYND19Q96E35 227 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TIMD4Q96H15 378 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 GPX7Q96SL4 187 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TEAD3Q99594 435 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 CTRCQ99895 268 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 RASL11BQ9BPW5 248 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 C7orf50Q9BRJ6 194 aaKnown RBP2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF649Q9BS31 505 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TMEM43Q9BTV4 400 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF426Q9BUY5 554 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 HDHD2Q9H0R4 259 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 C12orf10Q9HB07 376 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 NEK6Q9HC98 313 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 MCCC2Q9HCC0 563 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM60AQ9NP50 221 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 UBQLN4Q9NRR5 601 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 INIPQ9NRY2 104 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 ABRACLQ9P1F3 81 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 GNG8Q9UK08 70 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 COPS3Q9UNS2 423 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 TMEM131Q92545 1883 aa2.87□□□□□ -1.95
HMGB3P6-201ENST00000444896 BRWD1Q9NSI6 2320 aa2.86□□□□□ -1.95
HMGB3P6-201ENST00000444896 TRAV26-1A0A087WT03 109 aa2.86□□□□□ -1.95
HMGB3P6-201ENST00000444896 ARPC4-TTLL3A0A0A6YYG9 625 aa2.86□□□□□ -1.95
HMGB3P6-201ENST00000444896 NSG1A0A0A6YYJ2 146 aa2.86□□□□□ -1.95
HMGB3P6-201ENST00000444896 A0A1W2PQD3 144 aa2.86□□□□□ -1.95
HMGB3P6-201ENST00000444896 A0A1W2PRG6 482 aa2.86□□□□□ -1.95
HMGB3P6-201ENST00000444896 LRRN3E7EW58 273 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms