RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 LRRC10Q5BKY1 277 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 DCST2Q5T1A1 773 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 SPATA31B1PQ5VZV4 182 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM166AQ6J272 317 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 HEPN1Q6WQI6 88 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 PPP1R32Q7Z5V6 425 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 FTMTQ8N4E7 242 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 B3GALNT2Q8NCR0 500 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR52E2Q8NGJ4 325 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR13A1Q8NGR1 328 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR2G3Q8NGZ4 309 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR4C3Q8NH37 302 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 BLNKQ8WV28 456 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMED6Q8WW62 240 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 PP6455Q8WZ26 134 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM106AQ96A25 262 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 RSPRY1Q96DX4 576 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 TIMD4Q96H15 378 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 DIRAS2Q96HU8 199 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 DEFB118Q96PH6 123 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 TBX15Q96SF7 602 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 ATP5SQ99766 215 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 ANAPC13Q9BS18 74 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 SMIM3Q9BZL3 60 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 COA1Q9GZY4 146 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 SLC25A31Q9H0C2 315 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 MED28Q9H204 178 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 MS4A6AQ9H2W1 248 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 MOB1AQ9H8S9 216 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 KCNJ16Q9NPI9 418 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 ASF1BQ9NVP2 202 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM206AQ9NX38 181 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF586Q9NXT0 402 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 BET1LQ9NYM9 111 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 SIGLEC7Q9Y286 467 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 LOXL2Q9Y4K0 774 aa4□□□□□ -1.77
HMGB3P9-201ENST00000441799 LSM5Q9Y4Y9 91 aaKnown RBP4□□□□□ -1.77
HMGB3P9-201ENST00000441799 MYH9P35579 1960 aaKnown RBP4□□□□□ -1.77
HMGB3P9-201ENST00000441799 IGHV1-69-2A0A0G2JMI3 117 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 C1orf226A1L170 272 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 HMSDA8MTL9 139 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 M0R2Z0 102 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 ENSAO43768 121 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 TOXO94900 526 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 CLDN1O95832 211 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 IGLC1P0CG04 106 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SMIM10L2AP0DMW4 78 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SMIM10L2BP0DMW5 78 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR12D1P0DN82 309 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 FABP4P15090 132 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 PVRP15151 417 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 CD1DP15813 335 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 MGMTP16455 207 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 PRTN3P24158 256 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 CDK2P24941 298 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 POLR2IP36954 125 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 RPL13AP40429 203 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR1D4P47884 311 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 CXCL12P48061 93 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF84P51523 738 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 VAMP7P51809 220 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SNRPFP62306 86 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 RPL31P62899 125 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 UBA52P62987 128 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 EWSR1Q01844 656 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SIX1Q15475 284 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM255AQ5JRV8 349 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM236Q5W0B7 351 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SFXN4Q6P4A7 337 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF549Q6P9A3 640 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 IL34Q6ZMJ4 242 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 MEPCEQ7L2J0 689 aaKnown RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 RNF144BQ7Z419 303 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 LRRTM1Q86UE6 522 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF547Q8IVP9 402 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 FBXO16Q8IX29 292 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 C9orf40Q8IXQ3 194 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 TMEM183AQ8IXX5 376 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 FAM24BQ8N5W8 94 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 GCSAMQ8N6F7 178 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 KRTCAP2Q8N6L1 136 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 STPG4Q8N801 248 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR1S2Q8NGQ3 325 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 FBXO25Q8TCJ0 367 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 ZNF675Q8TD23 568 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 C15orf40Q8WUR7 153 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 CRYGNQ8WXF5 182 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 HIST1H2ACQ93077 130 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 LRRC58Q96CX6 371 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 YPEL4Q96NS1 127 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 GABRG3Q99928 467 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 NIPSNAP3BQ9BS92 247 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SAMD10Q9BYL1 202 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 SH3BGRL3Q9H299 93 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 OR51I2Q9H344 312 aa3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 UBE2TQ9NPD8 197 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P9-201ENST00000441799 CISHQ9NSE2 258 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms