RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 C9orf62Q8N4C0 152 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 EIF4E3Q8N5X7 224 aaKnown RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF615Q8N8J6 731 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 GDPD1Q8N9F7 314 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 CYB561A3Q8NBI2 242 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 HSD17B11Q8NBQ5 300 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR4M2Q8NGB6 313 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR4K17Q8NGC6 315 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR4K14Q8NGD5 310 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR9K2Q8NGE7 335 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR13F1Q8NGS4 319 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR13C9Q8NGT0 318 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR4K15Q8NH41 348 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 GPX8Q8TED1 209 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 CYGBQ8WWM9 190 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 CACNG8Q8WXS5 425 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 TMEM234Q8WY98 164 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 HGDQ93099 445 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 CREB3L1Q96BA8 519 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 CMTM5Q96DZ9 223 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 CMTM7Q96FZ5 175 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 MS4A14Q96JA4 679 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 HYLS1Q96M11 299 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 COL21A1Q96P44 957 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 ALKBH3Q96Q83 286 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC38A2Q96QD8 506 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 KCTD14Q9BQ13 255 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 KLHDC3Q9BQ90 382 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 MS4A8Q9BY19 250 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 NKX6-2Q9C056 277 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 NXF2Q9GZY0 626 aaKnown RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 RAB1BQ9H0U4 201 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 FNDC4Q9H6D8 234 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 TMEM185BQ9H7F4 350 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 CXorf21Q9HAI6 301 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 PTTG3PQ9NZH4 202 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 MTCH1Q9NZJ7 389 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 PRODH2Q9UF12 536 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 KLHL21Q9UJP4 597 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 FBXL3Q9UKT7 428 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF490Q9ULM2 529 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC22A13Q9Y226 551 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF337Q9Y3M9 751 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 TBL2Q9Y4P3 447 aaKnown RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 RBM7Q9Y580 266 aaKnown RBP3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 MAB21L2Q9Y586 359 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 TEX264Q9Y6I9 313 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 URGCP-MRPS24S4R325 110 aa3.5□□□□□ -1.85
HMGB3P5-201ENST00000428894 ARFGEF3Q5TH69 2177 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TRAV25A0A0B4J276 109 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 PNMA8CA0A1B0GUJ8 204 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 GJE1A6NN92 205 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 C5orf58C9J3I9 102 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 F8WDY8 70 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 H3BNH8 94 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 M0R143 59 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 DNASE2O00115 360 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TGOLN2O43493 480 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 RAD51CO43502 376 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 RAMP1O60894 148 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 REM1O75628 298 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 IFNA17P01571 189 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 CLPSP04118 112 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ABHD2P08910 425 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TSPAN19P0C672 248 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 UBCP0CG48 685 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 PET100P0DJ07 73 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MUC1P15941 1255 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 GPX3P22352 226 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 HLA-DMAP28067 261 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 GNRHRP30968 328 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ARR3P36575 388 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 PPICP45877 212 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 KCNJ1P48048 391 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TGM4P49221 684 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MRPL19P49406 292 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 SNU13P55769 128 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 IRF8Q02556 426 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ECH1Q13011 328 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 GK2Q14410 553 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MICBQ29980 383 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MICAQ29983 383 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 SMIM21Q3B7S5 101 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 NHLRC3Q5JS37 347 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TIMM23BQ5SRD1 257 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 LGSNQ5TDP6 509 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 TTC23Q5W5X9 447 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 C11orf71Q6IPW1 123 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 FAM45BPQ6NSW5 357 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF562Q6V9R5 426 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 DPY19L2P2Q6ZN68 376 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 MRPL21Q7Z2W9 205 aaKnown RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 FAM220AQ7Z4H9 259 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 RANBP3LQ86VV4 465 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 ZNF100Q8IYN0 542 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 BOD1L2Q8IYS8 172 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 GABRG1Q8N1C3 465 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR10W1Q8NGF6 305 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 OR56B1Q8NGI3 324 aa3.49□□□□□ -1.85
HMGB3P5-201ENST00000428894 FAM45AQ8TCE6 357 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms