RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 FXYD4P59646 89 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 HERV-K104P61576 105 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 CCL8P80075 99 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 MST1LQ2TV78 715 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 C11orf88Q6PI97 169 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 OR5T2Q8NGG2 359 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 LILRB1Q8NHL6 650 aaPredicted RBP12.73□□□□□ -0.37
ACTB-204ENST00000425660 ANGPTL6Q8NI99 470 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 CASTOR1Q8WTX7 329 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 NEUROG1Q92886 237 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 CHIAQ9BZP6 476 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 SLC2A9Q9NRM0 540 aa12.73□□□□□ -0.37
ACTB-204ENST00000425660 KMT2BQ9UMN6 2715 aaPredicted RBP12.73□□□□□ -0.37
ACTB-204ENST00000425660 HIVEP3Q5T1R4 2406 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 B9A039 149 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 SIX6O95475 246 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 GNLYP22749 145 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 DNASE1P24855 282 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 PIGPP57054 158 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 Q5BKY6 102 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 H1FOOQ8IZA3 346 aaPredicted RBP12.72□□□□□ -0.37
ACTB-204ENST00000425660 OR11L1Q8NGX0 322 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 OR10J5Q8NHC4 309 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 GALNT14Q96FL9 552 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 KIRREL1Q96J84 757 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 MS4A5Q9H3V2 200 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 ICE1Q9Y2F5 2266 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 CD8AP01732 235 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 TFF1P04155 84 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 GNRHRP30968 328 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 AESQ08117 197 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 TEX36Q5VZQ5 186 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 STUMQ69YW2 141 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 LAMTOR1Q6IAA8 161 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 LIN54Q6MZP7 749 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 SGPP2Q8IWX5 399 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 ASCC1Q8N9N2 400 aaKnown RBP12.72□□□□□ -0.37
ACTB-204ENST00000425660 COQ8AQ8NI60 647 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 ITLN2Q8WWU7 325 aaPredicted RBP12.72□□□□□ -0.37
ACTB-204ENST00000425660 RTN4IP1Q8WWV3 396 aaPredicted RBP12.72□□□□□ -0.37
ACTB-204ENST00000425660 WDR89Q96FK6 387 aaPredicted RBP12.72□□□□□ -0.37
ACTB-204ENST00000425660 SNX22Q96L94 193 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 EGLN1Q9GZT9 426 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 CISD1Q9NZ45 108 aaKnown RBP12.72□□□□□ -0.37
ACTB-204ENST00000425660 KIF25Q9UIL4 384 aa12.72□□□□□ -0.37
ACTB-204ENST00000425660 DIDO1Q9BTC0 2240 aaKnown RBP12.71□□□□□ -0.37
ACTB-204ENST00000425660 OOEPA6NGQ2 149 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 CLDN14O95500 239 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 PLAUP00749 431 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 IFNA2P01563 188 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 HEXAP06865 529 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 ROS1P08922 2347 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 MUC1P15941 1255 aaPredicted RBP12.71□□□□□ -0.38
ACTB-204ENST00000425660 SLC9A3R2Q15599 337 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 SWI5Q1ZZU3 235 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 ANKRD55Q3KP44 614 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 ZNF672Q499Z4 452 aaPredicted RBP12.71□□□□□ -0.38
ACTB-204ENST00000425660 KRBOX4Q5JUW0 171 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 FAM185AQ8N0U4 392 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 ZCCHC24Q8N2G6 241 aaKnown RBP12.71□□□□□ -0.38
ACTB-204ENST00000425660 C9orf62Q8N4C0 152 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 SDSLQ96GA7 329 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 SAP30LQ9HAJ7 183 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 RAB18Q9NP72 206 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 OR2W1Q9Y3N9 320 aa12.71□□□□□ -0.38
ACTB-204ENST00000425660 IGHV3OR15-7A0A075B7D8 119 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 TRAV39A0A0B4J263 110 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 K7N7A8 449 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 MGST3O14880 152 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 CYB5R3P00387 301 aaPredicted RBP12.7□□□□□ -0.38
ACTB-204ENST00000425660 IRF2P14316 349 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 GABRA2P47869 451 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 RND3P61587 244 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 LDLRAD3Q86YD5 345 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 ZNF561Q8N587 486 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 BOLLQ8N9W6 283 aaKnown RBP12.7□□□□□ -0.38
ACTB-204ENST00000425660 ZBTB8BQ8NAP8 495 aaPredicted RBP12.7□□□□□ -0.38
ACTB-204ENST00000425660 NAA60Q9H7X0 242 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 MAB21L2Q9Y586 359 aa12.7□□□□□ -0.38
ACTB-204ENST00000425660 IGKV1D-13A0A0B4J2D9 117 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 TEX13DA0A0J9YY54 714 aaPredicted RBP12.69□□□□□ -0.38
ACTB-204ENST00000425660 LRRC30A6NM36 301 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 C12orf77C9JDV5 145 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 ZG16O60844 167 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 IGKV1-13P0DP09 117 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 GLIPR1P48060 266 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 CR1LQ2VPA4 569 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 FAM201AQ5SY85 155 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 C6orf183Q5T699 404 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 KCTD9Q7L273 389 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 TGIF2LYQ8IUE0 185 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 IL1F10Q8WWZ1 152 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 LURAP1Q96LR2 239 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 TOLLIPQ9H0E2 274 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 NCOR1P1Q9H4R4 102 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 PLSCR3Q9NRY6 295 aa12.69□□□□□ -0.38
ACTB-204ENST00000425660 KCNIP1Q9NZI2 227 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms