RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 U3KQK5 164 aa11.05□□□□□ -0.64
RAPGEF1-204ENST00000414781 IGHV1-69DA0A0B4J2H0 117 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 CENPVL3A0A0U1RRI6 287 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 A0A1W2PP11 408 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 FABP12A6NFH5 140 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 RFPL4AA6NLU0 287 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 RFPL4AL1F8VTS6 287 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 GEMIN2O14893 280 aaKnown RBP11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 XRCC3O43542 346 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 IGHV1-69P01742 117 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 ZNF44P15621 663 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 ELK1P19419 428 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 GABRR1P24046 479 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 PTBP1P26599 531 aaKnown RBP eCLIP11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 BLVRBP30043 206 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 MNDAP41218 407 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 VEGFCP49767 419 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 EFNB2P52799 333 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 IKZF1Q13422 519 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 TMEM69Q5SWH9 247 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 ATPAF1Q5TC12 328 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 SLC36A1Q7Z2H8 476 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 SLC25A38Q96DW6 304 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 RAB3CQ96E17 227 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 PLEKHJ1Q9NW61 149 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 EXTL2Q9UBQ6 330 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 CLN8Q9UBY8 286 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 HSF4Q9ULV5 492 aa11.04□□□□□ -0.64
RAPGEF1-204ENST00000414781 LCE6AA0A183 80 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 NKX6-3A6NJ46 265 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 MCRIP1C9JLW8 97 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 RAB27BO00194 218 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 PDCD6O75340 191 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 HAND1O96004 215 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 EIF4EP06730 217 aaKnown RBP11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 LIPFP07098 398 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 PSG2P11465 335 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 LMO1P25800 156 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 ETV6P41212 452 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 KCNJ3P48549 501 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 ZNF45Q02386 682 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 SCN1BQ07699 218 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 PIGYQ3MUY2 71 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 ATAD3CQ5T2N8 411 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 SFRP4Q6FHJ7 346 aaPredicted RBP11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 SLC35E4Q6ICL7 350 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 CNIH2Q6PI25 160 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 DCDC5Q6ZRR9 648 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 LAX1Q8IWV1 398 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 BATF2Q8N1L9 274 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 ZNF561Q8N587 486 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 C11orf44Q8N8P7 122 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 OR5D13Q8NGL4 314 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 R3HDM4Q96D70 268 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 MIXL1Q9H2W2 232 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 KCNK15Q9H427 330 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 OR14J1Q9UGF5 321 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 FAM96BQ9Y3D0 163 aa11.03□□□□□ -0.64
RAPGEF1-204ENST00000414781 TRAV18A0A075B6X5 111 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 A0A0U1RQK1 487 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 SERPINE3A8MV23 424 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 CA11O75493 328 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 TOX4O94842 621 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 GSTP1P09211 210 aaKnown RBP11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 CDK2P24941 298 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 DUSP1P28562 367 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 GABRA2P47869 451 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 SNU13P55769 128 aaKnown RBP11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 MRPS15P82914 257 aaKnown RBP11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 STUMQ69YW2 141 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 PYHIN1Q6K0P9 492 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 KLHDC1Q8N7A1 406 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 OR5T2Q8NGG2 359 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 ANGPTL6Q8NI99 470 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 SDSLQ96GA7 329 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 FAM234AQ9H0X4 552 aa11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 MRPS7Q9Y2R9 242 aaKnown RBP11.02□□□□□ -0.65
RAPGEF1-204ENST00000414781 IGHV3OR15-7A0A075B7D8 119 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 WI2-2373I1.2A0A1W2PRP0 233 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 FUOMA2VDF0 154 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 SOCS1O15524 211 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 OR2H2O95918 312 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 CD33P20138 364 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 MRPS10P82664 201 aaKnown RBP11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 PLA2G7Q13093 441 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 IL18Q14116 193 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 PNLIPRP3Q17RR3 467 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 NSUN5P1Q3KNT7 163 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 CDNFQ49AH0 187 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 PAN3Q58A45 887 aaKnown RBP11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 FAM201AQ5SY85 155 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 CASC10Q5T4H9 136 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 CD276Q5ZPR3 534 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 Q6P435 159 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 FAM131AQ6UXB0 335 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 CCDC190Q86UF4 302 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 DTX3Q8N9I9 347 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 WFDC9Q8NEX5 89 aa11.01□□□□□ -0.65
RAPGEF1-204ENST00000414781 OR4M1Q8NGD0 313 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms