RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 FAM90A15PP0C7V4 464 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 FAM90A13PP0C7W8 464 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 FAM90A14PP0C7W9 464 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 FAM90A24PP0C7X0 464 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 DYNLT3P51808 116 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 RBM39Q14498 530 aaKnown RBP15.17■□□□□ 0.02
TRIM56-202ENST00000412507 OR10K2Q6IF99 312 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 ZNF497Q6ZNH5 498 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 OR9G1Q8NH87 305 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 CYYR1Q96J86 154 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 KCNK15Q9H427 330 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 ACOT13Q9NPJ3 140 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 ETAA1Q9NY74 926 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 SIGLEC9Q9Y336 463 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 WNK1Q9H4A3 2382 aa15.17■□□□□ 0.02
TRIM56-202ENST00000412507 BUB1B-PAK6H3BSN5 160 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 F2RL2O00254 374 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 DENRO43583 198 aaKnown RBP15.16■□□□□ 0.02
TRIM56-202ENST00000412507 MT-ND4P03905 459 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 UBBP0CG47 229 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 VSIG8P0DPA2 414 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 GZMHP20718 246 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 PSMA1P25786 263 aaKnown RBP15.16■□□□□ 0.02
TRIM56-202ENST00000412507 HTR2CP28335 458 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 GABRA5P31644 462 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 GABARAPL2P60520 117 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 FABP5Q01469 135 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 SIGIRRQ6IA17 410 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 ZNF367Q7RTV3 350 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 OR4C13Q8NGP0 309 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 UBALD1Q8TB05 177 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 GFI1Q99684 422 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 CITED1Q99966 193 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 CST11Q9H112 138 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 MMP28Q9H239 520 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 FBLN5Q9UBX5 448 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 PITPNC1Q9UKF7 332 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 PSG11Q9UQ72 335 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 MGAM2Q2M2H8 2515 aa15.16■□□□□ 0.02
TRIM56-202ENST00000412507 UBE2QL1A1L167 161 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 J3QR06 171 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 AIPO00170 330 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 ARL6IP5O75915 188 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 CD37P11049 281 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 FUT3P21217 361 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 CEACAM3P40198 252 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 KIR2DS4P43632 304 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 EMX1Q04741 257 aaPredicted RBP15.15■□□□□ 0.02
TRIM56-202ENST00000412507 SSX1Q16384 188 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 OR10A7Q8NGE5 316 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 ARL11Q969Q4 196 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 NPFFR1Q9GZQ6 430 aa15.15■□□□□ 0.02
TRIM56-202ENST00000412507 RANBP3Q9H6Z4 567 aaPredicted RBP15.15■□□□□ 0.02
TRIM56-202ENST00000412507 AK6Q9Y3D8 172 aaKnown RBP15.15■□□□□ 0.02
TRIM56-202ENST00000412507 LY6LH3BQJ8 138 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 C15orf65H3BRN8 121 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 SLC22A1O15245 554 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 CD24P25063 80 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 CALRP27797 417 aaKnown RBP15.14■□□□□ 0.01
TRIM56-202ENST00000412507 GNG10P50151 68 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 UNC119Q13432 240 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 TPTE2P1Q5T6R2 138 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 SYT6Q5T7P8 510 aaPredicted RBP15.14■□□□□ 0.01
TRIM56-202ENST00000412507 OR4K15Q8NH41 348 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 CREB3L1Q96BA8 519 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 TMEM59Q9BXS4 323 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 ZNF696Q9H7X3 374 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 VWFP04275 2813 aa15.14■□□□□ 0.01
TRIM56-202ENST00000412507 A0A1W2PPE3 182 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 ORC5O43913 435 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 PDCD6O75340 191 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 GLAP06280 429 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 BRS3P32247 399 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 EFNB2P52799 333 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 RPS27AP62979 156 aaKnown RBP15.13■□□□□ 0.01
TRIM56-202ENST00000412507 NKAPLQ5M9Q1 402 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 OR6M1Q8NGM8 313 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 OR2T6Q8NHC8 308 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 KCNG3Q8TAE7 436 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 PLGRKTQ9HBL7 147 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 TRAPPC2LQ9UL33 140 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 CMYA5Q8N3K9 4069 aa15.13■□□□□ 0.01
TRIM56-202ENST00000412507 IGHV3-43A0A0B4J1X8 118 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 TMEM14DPA8MWL7 114 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 C12orf77C9JDV5 145 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 MRPS14O60783 128 aaKnown RBP15.12■□□□□ 0.01
TRIM56-202ENST00000412507 BPNT1O95861 308 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 IGHV3-43DP0DP04 118 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 QRFPP83859 136 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 P2RY14Q15391 338 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 PRR31Q5SQ13 230 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 FAM53AQ6NSI3 398 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-202ENST00000412507 SLC16A12Q6ZSM3 486 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 GAPTQ8N292 157 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 SVOPQ8N4V2 548 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 NICN1Q9BSH3 213 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 ZNF702PQ9H963 129 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 AMMECR1Q9Y4X0 333 aaPredicted RBP15.12■□□□□ 0.01
TRIM56-202ENST00000412507 LRRC42Q9Y546 428 aa15.12■□□□□ 0.01
TRIM56-202ENST00000412507 OOSP1A8MZH6 123 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms